Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 AP000756.2-201ENST00000624168 2567 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ABCA3Q99758 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.62□□□□□ -1.35
ABCA3Q99758 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.62□□□□□ -1.35
ABCA3Q99758 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 TBCAP2-201ENST00000416175 326 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AL359073.1-201ENST00000448036 403 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.62□□□□□ -1.35
ABCA3Q99758 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.62□□□□□ -1.35
ABCA3Q99758 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.62□□□□□ -1.35
ABCA3Q99758 BNIP3P5-201ENST00000562290 498 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ABCA3Q99758 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.62□□□□□ -1.35
ABCA3Q99758 MIR3939-201ENST00000582614 106 ntBASIC6.62□□□□□ -1.35
ABCA3Q99758 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ABCA3Q99758 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.62□□□□□ -1.35
ABCA3Q99758 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
ABCA3Q99758 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ABCA3Q99758 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
ABCA3Q99758 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
ABCA3Q99758 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ABCA3Q99758 AC104118.1-201ENST00000607625 1589 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.61□□□□□ -1.35
ABCA3Q99758 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ABCA3Q99758 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.61□□□□□ -1.35
ABCA3Q99758 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.61□□□□□ -1.35
ABCA3Q99758 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
ABCA3Q99758 RN7SKP227-201ENST00000364445 330 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 RN7SKP153-201ENST00000365026 316 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 RPL7P57-201ENST00000423238 740 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 RPL7P32-201ENST00000457119 744 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 AC108751.3-201ENST00000461814 1020 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.61□□□□□ -1.35
ABCA3Q99758 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.61□□□□□ -1.35
ABCA3Q99758 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.61□□□□□ -1.35
ABCA3Q99758 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.61□□□□□ -1.35
ABCA3Q99758 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.61□□□□□ -1.35
ABCA3Q99758 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.61□□□□□ -1.35
ABCA3Q99758 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ABCA3Q99758 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
ABCA3Q99758 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ABCA3Q99758 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ABCA3Q99758 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
ABCA3Q99758 IQCB2P-201ENST00000401788 1633 ntBASIC6.61□□□□□ -1.35
ABCA3Q99758 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
ABCA3Q99758 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ABCA3Q99758 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ABCA3Q99758 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ABCA3Q99758 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ABCA3Q99758 RN7SKP145-201ENST00000363291 303 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 U3.10-201ENST00000364459 214 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 RNA5SP509-201ENST00000364577 119 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 SNORA70.10-201ENST00000384515 134 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ABCA3Q99758 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ABCA3Q99758 GLUD1P9-201ENST00000420997 1173 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.6□□□□□ -1.35
ABCA3Q99758 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ABCA3Q99758 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.6□□□□□ -1.35
ABCA3Q99758 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.6□□□□□ -1.35
ABCA3Q99758 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.6□□□□□ -1.35
ABCA3Q99758 AC010632.3-201ENST00000611377 369 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.6□□□□□ -1.35
ABCA3Q99758 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ABCA3Q99758 ZNF812P-201ENST00000457674 1694 ntBASIC6.6□□□□□ -1.35
ABCA3Q99758 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
ABCA3Q99758 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ABCA3Q99758 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ABCA3Q99758 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ABCA3Q99758 RBPJP2-201ENST00000618187 1444 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.59□□□□□ -1.35
ABCA3Q99758 RPS27AP12-201ENST00000429552 465 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 RPL12P28-201ENST00000430852 489 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 FHP1-201ENST00000442741 703 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 RPL21P129-201ENST00000491732 478 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 RN7SL244P-201ENST00000493405 297 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.59□□□□□ -1.35
ABCA3Q99758 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.59□□□□□ -1.35
ABCA3Q99758 HMGB1P23-201ENST00000518743 568 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.59□□□□□ -1.35
ABCA3Q99758 AP000619.2-201ENST00000546014 969 ntBASIC6.59□□□□□ -1.35
ABCA3Q99758 AP001357.1-201ENST00000586304 1053 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms