Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AC018628.1-201ENST00000624147 3819 ntBASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 RNU1-74P-201ENST00000384108 171 ntBASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AC020779.1-201ENST00000478757 796 ntBASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 MTCO1P49-201ENST00000523429 802 ntBASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AC008739.3-201ENST00000603262 127 ntBASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 AC025031.4-201ENST00000621248 3271 ntBASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CSMD1Q96PZ7 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL672167.2-201ENST00000377164 879 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 RIMKLBP2-201ENST00000424737 654 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL132765.1-201ENST00000434165 553 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 RPL23AP2-201ENST00000471227 466 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC084783.1-201ENST00000565846 910 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC007497.1-201ENST00000610421 561 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AP000843.1-201ENST00000624880 701 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC233968.1-201ENST00000611212 1300 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 SNORD1C-201ENST00000363315 78 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 RNA5SP372-201ENST00000390836 115 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 OR51B3P-201ENST00000412287 913 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC079168.1-201ENST00000458741 345 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 NPM1P6-201ENST00000521088 871 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL138960.1-201ENST00000613838 513 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL121890.2-201ENST00000617644 465 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC039056.2-201ENST00000622261 511 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC091959.2-201ENST00000477363 321 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL049536.1-201ENST00000625043 744 ntBASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CSMD1Q96PZ7 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 RNU1-59P-201ENST00000364829 162 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 GNG5P2-201ENST00000372054 207 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 IGHV5-78-201ENST00000450948 295 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 RN7SL443P-201ENST00000464331 290 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 PMS2P3-207ENST00000529061 717 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 AC011471.1-201ENST00000585766 187 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 U1.25-201ENST00000614085 162 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 U1.34-201ENST00000618578 162 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 U1.31-201ENST00000620022 160 ntBASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.16□□□□□ -1.74
CSMD1Q96PZ7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms