Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 AC027026.1-201ENST00000532323 742 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 AC007225.2-201ENST00000562529 256 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 RBM22P1-201ENST00000578589 1214 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 MIR6839-201ENST00000620425 113 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 MIR6837-201ENST00000620884 64 ntBASIC4.96□□□□□ -1.62
COL21A1Q96P44 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL21A1Q96P44 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL21A1Q96P44 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL21A1Q96P44 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL21A1Q96P44 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL21A1Q96P44 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 NAMPTP1-201ENST00000440465 2514 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 AL022322.2-201ENST00000624072 20397 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC000374.1-201ENST00000434698 1745 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 RN7SKP74-201ENST00000362849 309 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 RN7SKP162-201ENST00000363605 345 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 RN7SKP153-201ENST00000365026 316 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 RNA5SP339-201ENST00000390987 122 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 HSPA8P15-201ENST00000401676 786 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 AL390774.1-201ENST00000411924 246 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 HSPE1P16-201ENST00000426640 348 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 CLUHP1-201ENST00000435012 1190 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 GTF3AP5-201ENST00000442645 697 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AL157385.1-201ENST00000446973 268 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 OR2AO1P-201ENST00000476497 403 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 RPL7P39-201ENST00000481157 744 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 RPL7P41-201ENST00000485823 957 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 FKBP1AP1-201ENST00000594588 318 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 BNIP3P41-202ENST00000616656 861 ntBASIC4.95□□□□□ -1.62
COL21A1Q96P44 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL21A1Q96P44 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL21A1Q96P44 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL21A1Q96P44 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC100778.3-201ENST00000580060 1750 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 MTCO1P11-201ENST00000429111 1528 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL21A1Q96P44 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL21A1Q96P44 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 AL050305.1-201ENST00000399993 1230 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 AL391361.1-201ENST00000405580 489 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC104333.2-201ENST00000422630 192 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 FAM96AP1-201ENST00000430879 482 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 RPL7L1P9-201ENST00000431298 745 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 CFL1P1-202ENST00000432948 411 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 CBX1P5-201ENST00000475330 559 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC135999.1-201ENST00000478962 479 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 RPL7P40-201ENST00000481703 745 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC058823.1-201ENST00000485315 474 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 RPEP1-201ENST00000504507 658 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC126177.5-201ENST00000549599 178 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 AP000864.1-201ENST00000609424 650 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 MIR6798-201ENST00000612887 67 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 AC073869.7-201ENST00000640874 297 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 CASC19-264ENST00000641912 1184 ntBASIC4.94□□□□□ -1.62
COL21A1Q96P44 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.94□□□□□ -1.62
COL21A1Q96P44 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms