Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL049838.1-201ENST00000563647 981 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 DPPA2P4-201ENST00000563717 878 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC010735.1-201ENST00000567305 1026 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AC106734.1-201ENST00000568646 663 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
HPS3Q969F9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC009237.12-201ENST00000604755 742 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.34□□□□□ -1.39
HPS3Q969F9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.34□□□□□ -1.39
HPS3Q969F9 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.34□□□□□ -1.39
HPS3Q969F9 AP001153.1-201ENST00000641024 338 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 OR8G3P-202ENST00000641572 1255 ntBASIC6.34□□□□□ -1.39
HPS3Q969F9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.34□□□□□ -1.39
HPS3Q969F9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.34□□□□□ -1.39
HPS3Q969F9 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HPS3Q969F9 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS3Q969F9 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HPS3Q969F9 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HPS3Q969F9 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
HPS3Q969F9 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HPS3Q969F9 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.33□□□□□ -1.4
HPS3Q969F9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.33□□□□□ -1.4
HPS3Q969F9 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 AL355834.1-201ENST00000556602 3965 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AL627171.1-201ENST00000618845 1308 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 AC245060.4-201ENST00000413293 1121 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 TCEA1P2-201ENST00000420496 906 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 PNRC2P1-201ENST00000423940 420 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC127526.2-201ENST00000426436 775 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HPS3Q969F9 HMGB3P24-201ENST00000433260 622 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.33□□□□□ -1.4
HPS3Q969F9 RPL7P61-201ENST00000451721 751 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 ACA64.1-201ENST00000459171 127 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC104164.3-201ENST00000467363 1258 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC020779.1-201ENST00000478757 796 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 RPS7P6-201ENST00000485777 579 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 PDCL3P4-201ENST00000489621 720 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 SUMO2P5-201ENST00000506790 245 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC021678.3-201ENST00000517893 476 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC109635.6-201ENST00000525487 1113 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.33□□□□□ -1.4
HPS3Q969F9 AC118942.1-201ENST00000529674 1035 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.33□□□□□ -1.4
HPS3Q969F9 MTND1P24-201ENST00000552175 861 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 AC069431.2-201ENST00000604149 1099 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC013244.3-201ENST00000605614 388 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.33□□□□□ -1.4
HPS3Q969F9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 RMST_10.1-201ENST00000616309 154 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 AC084824.4-201ENST00000620106 731 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.33□□□□□ -1.4
HPS3Q969F9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.33□□□□□ -1.4
HPS3Q969F9 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HPS3Q969F9 AC006927.4-201ENST00000639187 543 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 MTCO1P7-201ENST00000419523 1542 ntBASIC6.33□□□□□ -1.4
HPS3Q969F9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HPS3Q969F9 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HPS3Q969F9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.33□□□□□ -1.4
HPS3Q969F9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 CASC19-281ENST00000642118 1554 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HPS3Q969F9 WDR95P-201ENST00000425638 1542 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC239868.2-201ENST00000564237 4527 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 SNORA64.1-201ENST00000362600 132 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC087752.1-201ENST00000391360 558 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 RN7SKP279-201ENST00000411383 298 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 RPS3AP25-201ENST00000411660 793 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.32□□□□□ -1.4
HPS3Q969F9 AC234781.4-201ENST00000419384 244 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AL035660.1-201ENST00000422041 222 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.32□□□□□ -1.4
HPS3Q969F9 DEFB130D-201ENST00000426866 237 ntBASIC6.32□□□□□ -1.4
HPS3Q969F9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.32□□□□□ -1.4
HPS3Q969F9 FABP5P3-201ENST00000437960 408 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms