Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC092691.2-201ENST00000461787 803 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AL157777.1-201ENST00000468100 304 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC4Q92889 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC027026.1-201ENST00000532323 742 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC024405.1-201ENST00000532521 1042 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC007346.1-201ENST00000569208 867 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 CBX3P2-202ENST00000583365 535 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.61□□□□□ -1.35
ERCC4Q92889 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AL049844.2-201ENST00000604280 628 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AL133481.2-203ENST00000607558 139 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC4Q92889 Z95327.3-201ENST00000610385 572 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 VN1R9P-201ENST00000614184 867 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.61□□□□□ -1.35
ERCC4Q92889 AC104985.3-201ENST00000623479 597 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC079416.3-201ENST00000624479 549 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 AC073488.3-201ENST00000631611 778 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 MTND5P11-201ENST00000511037 1812 ntBASIC6.61□□□□□ -1.35
ERCC4Q92889 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
ERCC4Q92889 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
ERCC4Q92889 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
ERCC4Q92889 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC109446.4-201ENST00000623235 2755 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 MFSD8-213ENST00000641134 1327 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC4Q92889 ATP5F1P2-201ENST00000398143 760 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 YWHAZP6-201ENST00000399764 738 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 RN7SKP86-201ENST00000410454 332 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 RN7SKP97-201ENST00000410966 333 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AL354890.1-201ENST00000413730 346 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 RPL35AP3-201ENST00000414680 288 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 ZNF885P-201ENST00000420174 1098 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 RPL24P2-201ENST00000421023 475 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 OR2X1P-201ENST00000421144 687 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC4Q92889 VTI1BP4-201ENST00000427516 527 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC242426.1-201ENST00000435270 960 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC112492.1-201ENST00000449607 712 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 OR52E7P-201ENST00000452394 933 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC092155.2-201ENST00000454675 477 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 NAP1L1P3-201ENST00000462291 880 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 OR7E22P-201ENST00000478335 1035 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AC006539.1-201ENST00000481419 501 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC083795.1-201ENST00000491760 320 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC4Q92889 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC4Q92889 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 IGLV3-30-201ENST00000524362 298 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 OSBPL9P5-201ENST00000542581 171 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC107958.1-201ENST00000556576 290 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC4Q92889 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC005726.4-201ENST00000582858 458 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AC073137.1-201ENST00000605636 634 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC4Q92889 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC4Q92889 AL133370.2-201ENST00000619934 439 ntBASIC6.6□□□□□ -1.35
ERCC4Q92889 AC068620.4-201ENST00000636730 1182 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms