Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AP002370.1-201ENST00000528055 1602 ntBASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM48Q8IWZ4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 DOCK11P1-201ENST00000553480 5932 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC013488.1-201ENST00000526618 1838 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC007159.1-201ENST00000566529 4706 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 HMGB3P18-201ENST00000406327 590 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL139805.1-201ENST00000407837 289 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC01347-201ENST00000417964 355 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 RPA2P2-201ENST00000419698 796 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC002069.1-201ENST00000429649 1159 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 IGLV3-4-201ENST00000432300 244 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL354941.1-201ENST00000438600 464 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 RPSAP40-201ENST00000442343 891 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC097499.1-201ENST00000444277 208 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 RPL5P12-201ENST00000477071 851 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC068724.1-201ENST00000487100 792 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 RPL37P23-201ENST00000492641 294 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC018797.1-201ENST00000510791 255 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC011352.1-201ENST00000512300 793 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 RN7SKP70-201ENST00000516655 271 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 MTND1P5-201ENST00000517906 940 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 HIGD1AP18-201ENST00000520730 278 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 IGHV4-55-201ENST00000520889 368 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC084121.1-201ENST00000533882 835 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AGGF1P4-201ENST00000568249 801 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 NTAN1P1-201ENST00000603150 646 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL021997.1-201ENST00000605757 193 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL592148.2-201ENST00000612210 372 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC090246.1-201ENST00000616499 426 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC099842.1-201ENST00000619919 596 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AL035661.1-201ENST00000620459 1144 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 AC117409.1-201ENST00000470499 1310 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 TNPO1P2-201ENST00000426249 2665 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 CR381670.1-201ENST00000624291 1693 ntBASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.2□□□□□ -1.42
TRIM48Q8IWZ4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 MTND4P34-201ENST00000572715 1371 ntBASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRIM48Q8IWZ4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms