Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC073073.1-201ENST00000493920 463 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC090638.1-201ENST00000498296 909 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC024405.1-201ENST00000532521 1042 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 SETP1-201ENST00000556014 845 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC010547.7-201ENST00000570323 333 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MIR4271-201ENST00000582451 67 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 BNIP3P35-201ENST00000604530 490 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MIR6071-201ENST00000616741 78 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC074140.1-201ENST00000621617 208 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ZNF652P1-201ENST00000442420 1309 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AP001642.1-201ENST00000624727 2117 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NUDCD3Q8IVD9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 OR6E1P-201ENST00000414424 923 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 COX6CP13-201ENST00000428703 226 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AL389925.1-201ENST00000432257 728 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC093166.2-201ENST00000455969 1017 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC091180.1-201ENST00000462104 372 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC005412.2-201ENST00000492004 341 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 RPL37P23-201ENST00000492641 294 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 RN7SL447P-201ENST00000494711 245 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC006499.4-201ENST00000510947 694 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP473-201ENST00000516402 125 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 AL929601.4-201ENST00000613011 1341 ntBASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUDCD3Q8IVD9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 MIR133B-201ENST00000362210 119 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 RNA5SP46-201ENST00000362370 120 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC013442.1-201ENST00000397347 228 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC093155.2-201ENST00000420734 937 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AC115283.1-201ENST00000427353 400 ntBASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUDCD3Q8IVD9 AL356981.1-201ENST00000454879 684 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms