Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 AL078621.3-201ENST00000623707 2042 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDK3Q00526 U3.2-201ENST00000362981 210 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 UBE2V1P15-201ENST00000407776 448 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 AL139148.1-201ENST00000427122 680 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK3Q00526 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 MTND2P25-201ENST00000449028 610 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 FAR2P1-206ENST00000449736 709 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
CDK3Q00526 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 RPL7P6-201ENST00000480903 738 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC079841.1-201ENST00000481228 950 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC072052.1-201ENST00000496556 306 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.32□□□□□ -1.56
CDK3Q00526 AC091912.1-201ENST00000511351 248 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 RNA5SP92-201ENST00000516437 110 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 RNU6-889P-201ENST00000517189 103 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 LINC00557-201ENST00000563184 1279 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 RN7SL356P-201ENST00000582228 248 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.32□□□□□ -1.56
CDK3Q00526 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 OR4H6P-202ENST00000603819 340 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.32□□□□□ -1.56
CDK3Q00526 AL139124.1-201ENST00000609123 421 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 AP003499.2-201ENST00000624100 483 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC005618.4-201ENST00000625053 554 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK3Q00526 CYP4F35P-202ENST00000636121 390 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC006453.5-201ENST00000636451 619 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 AC000095.2-202ENST00000637415 154 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK3Q00526 C4BPAP1-201ENST00000415474 1893 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK3Q00526 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK3Q00526 NCOA4P2-201ENST00000340589 1813 ntBASIC5.32□□□□□ -1.56
CDK3Q00526 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK3Q00526 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
CDK3Q00526 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 AC015799.1-201ENST00000622996 3122 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK3Q00526 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDK3Q00526 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDK3Q00526 SNORD65-201ENST00000391079 73 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AC093655.2-201ENST00000425735 631 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 AL627308.1-201ENST00000435693 821 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK3Q00526 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK3Q00526 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK3Q00526 SNRPCP3-201ENST00000474888 476 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 RN7SL727P-201ENST00000482164 296 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 SETP12-201ENST00000514068 805 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 RN7SKP34-201ENST00000516142 244 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK3Q00526 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 OR8Q1P-201ENST00000526467 655 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 OR8G3P-201ENST00000533406 921 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK3Q00526 NMNAT1P5-201ENST00000559657 841 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AC016180.1-201ENST00000567945 403 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK3Q00526 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.31□□□□□ -1.56
CDK3Q00526 AC069307.1-201ENST00000602820 447 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AC126915.2-201ENST00000610957 190 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AL356490.1-201ENST00000623079 479 ntBASIC5.31□□□□□ -1.56
CDK3Q00526 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK3Q00526 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms