Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 AC017104.4-201ENST00000636283 1592 ntBASIC3.94□□□□□ -1.78
CCL20P78556 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 MTCO1P46-201ENST00000451639 1491 ntBASIC3.94□□□□□ -1.78
CCL20P78556 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCL20P78556 RNA5SP28-201ENST00000363841 119 ntBASIC3.94□□□□□ -1.78
CCL20P78556 SNORA2.3-201ENST00000383920 135 ntBASIC3.94□□□□□ -1.78
CCL20P78556 OR7E101P-201ENST00000400428 513 ntBASIC3.94□□□□□ -1.78
CCL20P78556 HDGFP1-201ENST00000405943 252 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.94□□□□□ -1.78
CCL20P78556 AL133173.1-201ENST00000423458 397 ntBASIC3.94□□□□□ -1.78
CCL20P78556 CLCN3P1-201ENST00000423965 1017 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC3.94□□□□□ -1.78
CCL20P78556 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.94□□□□□ -1.78
CCL20P78556 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.94□□□□□ -1.78
CCL20P78556 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 AL450023.3-201ENST00000440592 271 ntBASIC3.94□□□□□ -1.78
CCL20P78556 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 AC019185.1-201ENST00000442718 389 ntBASIC3.94□□□□□ -1.78
CCL20P78556 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 AC007383.1-201ENST00000445875 636 ntBASIC3.94□□□□□ -1.78
CCL20P78556 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 AL691482.1-201ENST00000453255 87 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 CTSLP6-201ENST00000458273 1002 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 GUSBP9-201ENST00000510138 584 ntBASIC3.94□□□□□ -1.78
CCL20P78556 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCL20P78556 RNU6-615P-201ENST00000516065 106 ntBASIC3.94□□□□□ -1.78
CCL20P78556 RNA5SP360-201ENST00000516555 118 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC024940.3-201ENST00000538551 316 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 AL512310.9-201ENST00000553311 948 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CCL20P78556 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCL20P78556 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCL20P78556 AC124916.2-201ENST00000604416 224 ntBASIC3.94□□□□□ -1.78
CCL20P78556 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC244517.3-201ENST00000616254 1235 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC234782.5-201ENST00000617723 324 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC140113.4-201ENST00000622087 222 ntBASIC3.94□□□□□ -1.78
CCL20P78556 MIR6823-201ENST00000622118 61 ntBASIC3.94□□□□□ -1.78
CCL20P78556 AC015804.1-201ENST00000622935 435 ntBASIC3.94□□□□□ -1.78
CCL20P78556 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 OR8G3P-202ENST00000641572 1255 ntBASIC3.94□□□□□ -1.78
CCL20P78556 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCL20P78556 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCL20P78556 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC3.94□□□□□ -1.78
CCL20P78556 AC092111.2-201ENST00000611627 1414 ntBASIC3.94□□□□□ -1.78
CCL20P78556 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CCL20P78556 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCL20P78556 RNU1-20P-201ENST00000363314 162 ntBASIC3.93□□□□□ -1.78
CCL20P78556 RNA5SP394-201ENST00000364216 119 ntBASIC3.93□□□□□ -1.78
CCL20P78556 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCL20P78556 RNA5SP372-201ENST00000390836 115 ntBASIC3.93□□□□□ -1.78
CCL20P78556 MIR1203-201ENST00000408812 85 ntBASIC3.93□□□□□ -1.78
CCL20P78556 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 SLC20A1P1-201ENST00000413906 956 ntBASIC3.93□□□□□ -1.78
CCL20P78556 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 AL034379.1-201ENST00000423216 253 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AC092646.1-201ENST00000427142 901 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.93□□□□□ -1.78
CCL20P78556 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.93□□□□□ -1.78
CCL20P78556 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.93□□□□□ -1.78
CCL20P78556 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC3.93□□□□□ -1.78
CCL20P78556 AL450996.1-201ENST00000445574 1202 ntBASIC3.93□□□□□ -1.78
CCL20P78556 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.93□□□□□ -1.78
CCL20P78556 OTX2P1-201ENST00000450956 354 ntBASIC3.93□□□□□ -1.78
CCL20P78556 PPIAP27-201ENST00000453800 265 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AC104849.1-201ENST00000462623 405 ntBASIC3.93□□□□□ -1.78
CCL20P78556 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC3.93□□□□□ -1.78
CCL20P78556 RN7SL799P-201ENST00000475891 298 ntBASIC3.93□□□□□ -1.78
CCL20P78556 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.93□□□□□ -1.78
CCL20P78556 AC112484.3-201ENST00000505910 329 ntBASIC3.93□□□□□ -1.78
CCL20P78556 Y_RNA.667-201ENST00000516212 107 ntBASIC3.93□□□□□ -1.78
CCL20P78556 RNA5SP373-201ENST00000517271 95 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms