Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC007275.1-201ENST00000621243 671 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SEC61A1P61619 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A1P61619 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 AL603750.1-201ENST00000624216 1717 ntBASIC5.02□□□□□ -1.61
SEC61A1P61619 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A1P61619 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SEC61A1P61619 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A1P61619 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC130304.1-201ENST00000622942 2385 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AC093909.5-201ENST00000621839 1799 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A1P61619 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 MIR16-2-201ENST00000362117 81 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 RNU6-1251P-201ENST00000364502 107 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SEC61A1P61619 ANAPC10P1-201ENST00000395991 556 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 NACAP7-201ENST00000407371 609 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A1P61619 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC092634.2-201ENST00000428146 1010 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 BX323845.3-201ENST00000428215 527 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 CETN4P-201ENST00000432407 469 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AC242426.1-201ENST00000435270 960 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 PCBP2P1-201ENST00000437262 977 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 TRIM60P16-201ENST00000444048 694 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 MTND2P8-201ENST00000450555 1025 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC005412.2-201ENST00000492004 341 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 PPM1AP1-201ENST00000502740 1135 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 RN7SKP265-201ENST00000516448 223 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AP001804.2-201ENST00000533932 910 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.01□□□□□ -1.61
SEC61A1P61619 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.01□□□□□ -1.61
SEC61A1P61619 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC092121.1-201ENST00000569452 202 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AF230666.2-201ENST00000602328 725 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AC100767.2-201ENST00000604840 693 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AP005229.2-201ENST00000609980 697 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AC009039.2-201ENST00000624524 529 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 AC019080.5-201ENST00000624891 757 ntBASIC5.01□□□□□ -1.61
SEC61A1P61619 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SEC61A1P61619 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.01□□□□□ -1.61
SEC61A1P61619 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.01□□□□□ -1.61
SEC61A1P61619 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SEC61A1P61619 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SEC61A1P61619 TCP1P3-201ENST00000414406 1498 ntBASIC5□□□□□ -1.61
SEC61A1P61619 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5□□□□□ -1.61
SEC61A1P61619 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5□□□□□ -1.61
SEC61A1P61619 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5□□□□□ -1.61
SEC61A1P61619 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5□□□□□ -1.61
SEC61A1P61619 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5□□□□□ -1.61
SEC61A1P61619 U3.7-201ENST00000363668 216 ntBASIC5□□□□□ -1.61
SEC61A1P61619 RNA5SP510-201ENST00000364697 99 ntBASIC5□□□□□ -1.61
SEC61A1P61619 SNORA70.6-201ENST00000383934 134 ntBASIC5□□□□□ -1.61
SEC61A1P61619 SLC20A1P1-201ENST00000413906 956 ntBASIC5□□□□□ -1.61
SEC61A1P61619 RPL35AP3-201ENST00000414680 288 ntBASIC5□□□□□ -1.61
SEC61A1P61619 HYALP1-201ENST00000417674 1279 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms