Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 OR56A4-201ENST00000330728 1209 ntBASIC5.21□□□□□ -1.58
CDH12P55289 TMSB4XP2-201ENST00000335179 210 ntBASIC5.21□□□□□ -1.58
CDH12P55289 RNA5SP273-201ENST00000362484 113 ntBASIC5.21□□□□□ -1.58
CDH12P55289 RNU6-252P-201ENST00000363232 107 ntBASIC5.21□□□□□ -1.58
CDH12P55289 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 RPS3AP25-201ENST00000411660 793 ntBASIC5.21□□□□□ -1.58
CDH12P55289 VN1R51P-201ENST00000411675 945 ntBASIC5.21□□□□□ -1.58
CDH12P55289 RNF10P1-201ENST00000418589 369 ntBASIC5.21□□□□□ -1.58
CDH12P55289 DSTNP5-201ENST00000427921 523 ntBASIC5.21□□□□□ -1.58
CDH12P55289 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH12P55289 MTCYBP15-201ENST00000433123 1127 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 NDUFB4P8-201ENST00000435351 367 ntBASIC5.21□□□□□ -1.58
CDH12P55289 NDUFS5P5-201ENST00000437256 321 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH12P55289 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 YRDCP3-201ENST00000456507 480 ntBASIC5.21□□□□□ -1.58
CDH12P55289 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
CDH12P55289 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH12P55289 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH12P55289 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 OR7E13P-201ENST00000526052 910 ntBASIC5.21□□□□□ -1.58
CDH12P55289 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH12P55289 AP004609.2-201ENST00000532177 190 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 AC006512.2-201ENST00000543250 486 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC026826.3-201ENST00000561747 158 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH12P55289 MIR4260-201ENST00000583107 67 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH12P55289 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 LSM1P2-201ENST00000604911 322 ntBASIC5.21□□□□□ -1.58
CDH12P55289 FAM27E4-201ENST00000605259 342 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC006946.3-201ENST00000609791 756 ntBASIC5.21□□□□□ -1.58
CDH12P55289 MIR6889-201ENST00000613185 59 ntBASIC5.21□□□□□ -1.58
CDH12P55289 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.21□□□□□ -1.58
CDH12P55289 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 AC078880.5-201ENST00000617845 421 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AC048341.3-201ENST00000619323 491 ntBASIC5.21□□□□□ -1.58
CDH12P55289 AL591926.1-201ENST00000620542 217 ntBASIC5.21□□□□□ -1.58
CDH12P55289 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH12P55289 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH12P55289 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 AC144833.1-201ENST00000567953 4089 ntBASIC5.21□□□□□ -1.58
CDH12P55289 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
CDH12P55289 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH12P55289 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH12P55289 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 ICE2P1-201ENST00000512800 1849 ntBASIC5.2□□□□□ -1.58
CDH12P55289 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 ZNF90P1-201ENST00000480493 1951 ntBASIC5.2□□□□□ -1.58
CDH12P55289 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 AL359715.3-201ENST00000569267 2123 ntBASIC5.2□□□□□ -1.58
CDH12P55289 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
CDH12P55289 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 AC004158.1-201ENST00000564508 4319 ntBASIC5.2□□□□□ -1.58
CDH12P55289 RNU1-65P-201ENST00000363919 148 ntBASIC5.2□□□□□ -1.58
CDH12P55289 OR13C3-201ENST00000374781 1108 ntBASIC5.2□□□□□ -1.58
CDH12P55289 RNA5SP187-201ENST00000384400 119 ntBASIC5.2□□□□□ -1.58
CDH12P55289 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH12P55289 AL158825.1-201ENST00000414735 521 ntBASIC5.2□□□□□ -1.58
CDH12P55289 MTND2P2-201ENST00000434633 945 ntBASIC5.2□□□□□ -1.58
CDH12P55289 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 AC073465.2-201ENST00000440938 498 ntBASIC5.2□□□□□ -1.58
CDH12P55289 RPL5P25-201ENST00000441148 775 ntBASIC5.2□□□□□ -1.58
CDH12P55289 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH12P55289 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH12P55289 DUXAP8-207ENST00000456786 622 ntBASIC5.2□□□□□ -1.58
CDH12P55289 PSAT1P4-201ENST00000466500 526 ntBASIC5.2□□□□□ -1.58
CDH12P55289 RPL21P18-201ENST00000469899 480 ntBASIC5.2□□□□□ -1.58
CDH12P55289 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 LARP7P4-201ENST00000481075 878 ntBASIC5.2□□□□□ -1.58
CDH12P55289 RN7SL570P-201ENST00000484405 292 ntBASIC5.2□□□□□ -1.58
CDH12P55289 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH12P55289 AC122718.2-201ENST00000505325 591 ntBASIC5.2□□□□□ -1.58
CDH12P55289 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.2□□□□□ -1.58
CDH12P55289 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH12P55289 OR5H7P-201ENST00000514084 930 ntBASIC5.2□□□□□ -1.58
CDH12P55289 Y_RNA.667-201ENST00000516212 107 ntBASIC5.2□□□□□ -1.58
CDH12P55289 RN7SKP253-201ENST00000516424 309 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms