Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 RLIMP2-201ENST00000427891 1563 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 DDX6P1-205ENST00000441966 1436 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CLCNKAP51800 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLCNKAP51800 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 RNA5SP183-201ENST00000362452 119 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLCNKAP51800 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AC009804.1-201ENST00000400949 179 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AC002524.1-201ENST00000411687 547 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 NPM1P4-201ENST00000414095 812 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 RIMKLBP2-201ENST00000424737 654 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 SEC63P1-201ENST00000425785 1258 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 NPM1P26-201ENST00000426339 738 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 UBE2V1P6-201ENST00000430840 422 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AC092106.1-201ENST00000444291 373 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCNKAP51800 RPL7P45-201ENST00000455851 743 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 RN7SL547P-201ENST00000490793 290 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 SCARNA21.2-201ENST00000516600 166 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AP001804.2-201ENST00000533932 910 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AC084824.5-201ENST00000612009 413 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AL359513.1-201ENST00000614364 557 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AL590396.2-201ENST00000636511 1041 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 SAMMSON-209ENST00000641222 1100 ntBASIC5.42□□□□□ -1.54
CLCNKAP51800 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
CLCNKAP51800 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CLCNKAP51800 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
CLCNKAP51800 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
CLCNKAP51800 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLCNKAP51800 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 U3.10-201ENST00000364459 214 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 MIR421-201ENST00000365696 85 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 RPSAP35-201ENST00000413753 818 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 GTF3AP1-201ENST00000416942 1004 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC073508.1-201ENST00000428866 656 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 RPS26P39-201ENST00000469206 341 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 PCNAP1-201ENST00000505363 709 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.41□□□□□ -1.54
CLCNKAP51800 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CLCNKAP51800 OR5AM1P-201ENST00000532136 1032 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC122688.1-201ENST00000541494 223 ntBASIC5.41□□□□□ -1.54
CLCNKAP51800 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.41□□□□□ -1.54
CLCNKAP51800 AC084824.2-201ENST00000548906 345 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms