Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AP000542.2-201ENST00000623199 6179 ntBASIC5.72□□□□□ -1.49
SSR1P43307 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.72□□□□□ -1.49
SSR1P43307 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 RNU4-2-201ENST00000365668 141 ntBASIC5.72□□□□□ -1.49
SSR1P43307 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSR1P43307 RNU1-74P-201ENST00000384108 171 ntBASIC5.72□□□□□ -1.49
SSR1P43307 RNU6-178P-201ENST00000384631 104 ntBASIC5.72□□□□□ -1.49
SSR1P43307 GAPDHP42-201ENST00000406848 981 ntBASIC5.72□□□□□ -1.49
SSR1P43307 OR6E1P-201ENST00000414424 923 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AC012519.1-201ENST00000424588 610 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AKR1B10P1-201ENST00000425765 942 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.72□□□□□ -1.49
SSR1P43307 LDHBP2-201ENST00000456969 1005 ntBASIC5.72□□□□□ -1.49
SSR1P43307 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSR1P43307 AGGF1P3-201ENST00000493675 1213 ntBASIC5.72□□□□□ -1.49
SSR1P43307 IGBP1P4-201ENST00000503202 879 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AC021106.1-201ENST00000509020 1058 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.72□□□□□ -1.49
SSR1P43307 MTND6P2-201ENST00000512226 524 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.72□□□□□ -1.49
SSR1P43307 NANOGNBP2-201ENST00000544753 553 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.72□□□□□ -1.49
SSR1P43307 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
SSR1P43307 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.72□□□□□ -1.49
SSR1P43307 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.72□□□□□ -1.49
SSR1P43307 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.72□□□□□ -1.49
SSR1P43307 MIR7853-201ENST00000584820 132 ntBASIC5.72□□□□□ -1.49
SSR1P43307 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 AC108738.1-201ENST00000603703 237 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AL162574.1-201ENST00000615702 950 ntBASIC5.72□□□□□ -1.49
SSR1P43307 AC015908.5-201ENST00000623289 343 ntBASIC5.72□□□□□ -1.49
SSR1P43307 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 AC079298.1-201ENST00000625026 1619 ntBASIC5.72□□□□□ -1.49
SSR1P43307 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.72□□□□□ -1.49
SSR1P43307 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.72□□□□□ -1.49
SSR1P43307 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSR1P43307 AL022322.2-201ENST00000624072 20397 ntBASIC5.72□□□□□ -1.49
SSR1P43307 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.71□□□□□ -1.49
SSR1P43307 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SSR1P43307 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.71□□□□□ -1.49
SSR1P43307 HSPA8P17-201ENST00000427029 1382 ntBASIC5.71□□□□□ -1.5
SSR1P43307 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.71□□□□□ -1.5
SSR1P43307 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SSR1P43307 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSR1P43307 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSR1P43307 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SSR1P43307 KCTD9P1-201ENST00000430462 1167 ntBASIC5.71□□□□□ -1.5
SSR1P43307 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSR1P43307 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSR1P43307 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.71□□□□□ -1.5
SSR1P43307 AC073587.1-201ENST00000447093 876 ntBASIC5.71□□□□□ -1.5
SSR1P43307 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.71□□□□□ -1.5
SSR1P43307 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.71□□□□□ -1.5
SSR1P43307 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.71□□□□□ -1.5
SSR1P43307 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SSR1P43307 SNORD46.2-201ENST00000516021 102 ntBASIC5.71□□□□□ -1.5
SSR1P43307 SCARNA16.4-201ENST00000516956 187 ntBASIC5.71□□□□□ -1.5
SSR1P43307 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.71□□□□□ -1.5
SSR1P43307 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.71□□□□□ -1.5
SSR1P43307 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.71□□□□□ -1.5
SSR1P43307 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.71□□□□□ -1.5
SSR1P43307 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.71□□□□□ -1.5
SSR1P43307 AC012616.1-201ENST00000600294 197 ntBASIC5.71□□□□□ -1.5
SSR1P43307 AC010809.3-201ENST00000621310 641 ntBASIC5.71□□□□□ -1.5
SSR1P43307 CASC19-222ENST00000641321 1173 ntBASIC5.71□□□□□ -1.5
SSR1P43307 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSR1P43307 AC100757.1-201ENST00000616872 1835 ntBASIC5.71□□□□□ -1.5
SSR1P43307 LINC01109-201ENST00000603837 3081 ntBASIC5.71□□□□□ -1.5
SSR1P43307 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSR1P43307 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SSR1P43307 MIR621-201ENST00000384919 96 ntBASIC5.7□□□□□ -1.5
SSR1P43307 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.7□□□□□ -1.5
SSR1P43307 TNPO1P1-201ENST00000423641 1138 ntBASIC5.7□□□□□ -1.5
SSR1P43307 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.7□□□□□ -1.5
SSR1P43307 AL357520.1-201ENST00000441557 453 ntBASIC5.7□□□□□ -1.5
SSR1P43307 AC073109.1-201ENST00000445066 978 ntBASIC5.7□□□□□ -1.5
SSR1P43307 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.7□□□□□ -1.5
SSR1P43307 AL450023.1-201ENST00000450868 751 ntBASIC5.7□□□□□ -1.5
SSR1P43307 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.7□□□□□ -1.5
SSR1P43307 AC092754.1-201ENST00000472975 479 ntBASIC5.7□□□□□ -1.5
SSR1P43307 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SSR1P43307 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.7□□□□□ -1.5
SSR1P43307 AP002981.1-201ENST00000517692 975 ntBASIC5.7□□□□□ -1.5
SSR1P43307 DUX4L52-201ENST00000549363 777 ntBASIC5.7□□□□□ -1.5
SSR1P43307 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.7□□□□□ -1.5
SSR1P43307 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.7□□□□□ -1.5
SSR1P43307 AL118522.2-201ENST00000616045 615 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms