Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
USP8P40818 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.85□□□□□ -1.47
USP8P40818 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP8P40818 ADAM5-202ENST00000399789 1942 ntBASIC5.85□□□□□ -1.47
USP8P40818 OR55B1P-203ENST00000641518 2602 ntBASIC5.85□□□□□ -1.47
USP8P40818 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP8P40818 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
USP8P40818 AC000374.1-201ENST00000434698 1745 ntBASIC5.85□□□□□ -1.47
USP8P40818 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP8P40818 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
USP8P40818 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
USP8P40818 AC011447.7-201ENST00000624228 1590 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC006206.1-201ENST00000544842 3387 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.84□□□□□ -1.47
USP8P40818 SCN1A-220ENST00000641603 12506 ntBASIC5.84□□□□□ -1.47
USP8P40818 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 AL596448.1-201ENST00000415024 392 ntBASIC5.84□□□□□ -1.47
USP8P40818 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.84□□□□□ -1.47
USP8P40818 AC013410.1-201ENST00000436223 1232 ntBASIC5.84□□□□□ -1.47
USP8P40818 XKRYP6-201ENST00000440468 1116 ntBASIC5.84□□□□□ -1.47
USP8P40818 XKRYP3-201ENST00000442113 1116 ntBASIC5.84□□□□□ -1.47
USP8P40818 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.84□□□□□ -1.47
USP8P40818 TPRKBP1-201ENST00000456243 481 ntBASIC5.84□□□□□ -1.47
USP8P40818 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.84□□□□□ -1.47
USP8P40818 IGBP1P4-201ENST00000503202 879 ntBASIC5.84□□□□□ -1.47
USP8P40818 CCNHP1-201ENST00000513311 678 ntBASIC5.84□□□□□ -1.47
USP8P40818 HMGN1P9-201ENST00000515212 298 ntBASIC5.84□□□□□ -1.47
USP8P40818 SCARNA16.4-201ENST00000516956 187 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.84□□□□□ -1.47
USP8P40818 AC090022.1-201ENST00000546569 311 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.84□□□□□ -1.47
USP8P40818 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
USP8P40818 AC090888.3-201ENST00000558917 509 ntBASIC5.84□□□□□ -1.47
USP8P40818 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.84□□□□□ -1.47
USP8P40818 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.84□□□□□ -1.47
USP8P40818 MIR7853-201ENST00000584820 132 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.84□□□□□ -1.47
USP8P40818 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.84□□□□□ -1.47
USP8P40818 AC009237.13-201ENST00000603193 276 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC108738.1-201ENST00000603703 237 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.84□□□□□ -1.47
USP8P40818 AC003001.2-201ENST00000616294 831 ntBASIC5.84□□□□□ -1.47
USP8P40818 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 CU639417.4-201ENST00000623928 207 ntBASIC5.84□□□□□ -1.47
USP8P40818 AC020923.1-201ENST00000624021 917 ntBASIC5.84□□□□□ -1.47
USP8P40818 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 AP000720.1-201ENST00000625091 483 ntBASIC5.84□□□□□ -1.47
USP8P40818 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP8P40818 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
USP8P40818 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
USP8P40818 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
USP8P40818 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
USP8P40818 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP8P40818 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
USP8P40818 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.84□□□□□ -1.48
USP8P40818 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.84□□□□□ -1.48
USP8P40818 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP8P40818 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
USP8P40818 AC100757.1-201ENST00000616872 1835 ntBASIC5.83□□□□□ -1.48
USP8P40818 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
USP8P40818 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.83□□□□□ -1.48
USP8P40818 AC017079.1-201ENST00000333650 415 ntBASIC5.83□□□□□ -1.48
USP8P40818 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
USP8P40818 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 AL136116.2-201ENST00000404020 785 ntBASIC5.83□□□□□ -1.48
USP8P40818 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
USP8P40818 BMS1P17-202ENST00000416720 316 ntBASIC5.83□□□□□ -1.48
USP8P40818 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.83□□□□□ -1.48
USP8P40818 RPS29P14-201ENST00000431518 171 ntBASIC5.83□□□□□ -1.48
USP8P40818 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.83□□□□□ -1.48
USP8P40818 AL161636.2-201ENST00000445179 927 ntBASIC5.83□□□□□ -1.48
USP8P40818 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.83□□□□□ -1.48
USP8P40818 OR52E3P-201ENST00000452083 936 ntBASIC5.83□□□□□ -1.48
USP8P40818 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
USP8P40818 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 AGGF1P3-201ENST00000493675 1213 ntBASIC5.83□□□□□ -1.48
USP8P40818 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
USP8P40818 AC074087.1-201ENST00000512059 724 ntBASIC5.83□□□□□ -1.48
USP8P40818 AC098976.1-201ENST00000513014 541 ntBASIC5.83□□□□□ -1.48
USP8P40818 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.83□□□□□ -1.48
USP8P40818 SCARNA20.4-201ENST00000516969 131 ntBASIC5.83□□□□□ -1.48
USP8P40818 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.83□□□□□ -1.48
USP8P40818 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.83□□□□□ -1.48
USP8P40818 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms