Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 OR1L6-202ENST00000373684 1044 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA1P35221 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AC244453.4-201ENST00000419150 388 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AC046176.1-201ENST00000435260 1170 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.69□□□□□ -1.5
CTNNA1P35221 LDHBP2-201ENST00000456969 1005 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 RPS12P31-201ENST00000491419 398 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 RNA5SP271-201ENST00000516700 88 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 AC027369.5-201ENST00000533838 755 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 MRPS21P7-201ENST00000566937 238 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 PRPF19P1-201ENST00000584766 898 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA1P35221 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 AC083843.2-201ENST00000568248 6253 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.69□□□□□ -1.5
CTNNA1P35221 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CTNNA1P35221 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA1P35221 Z95331.1-201ENST00000623075 23112 ntBASIC5.69□□□□□ -1.5
CTNNA1P35221 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.69□□□□□ -1.5
CTNNA1P35221 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 SOCS5P3-201ENST00000425115 1576 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC106872.5-201ENST00000508856 1416 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 OR52B3P-201ENST00000314715 928 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 RNA5SP296-201ENST00000410523 111 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CTNNA1P35221 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 PRPF38AP1-201ENST00000451976 933 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 AC245028.2-201ENST00000458673 253 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 RPL5P13-201ENST00000462840 709 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA1P35221 RN7SL170P-201ENST00000487098 295 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 RPS24P16-201ENST00000497294 392 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CTNNA1P35221 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA1P35221 RNA5SP473-201ENST00000516402 125 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA1P35221 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CTNNA1P35221 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 LSM3P2-201ENST00000551246 273 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC040958.1-201ENST00000561102 201 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 AP001496.3-201ENST00000580230 913 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC012616.1-201ENST00000600294 197 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 AC108865.2-201ENST00000606881 432 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 MIR7109-201ENST00000613748 65 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.68□□□□□ -1.5
CTNNA1P35221 AC145207.9-201ENST00000623802 325 ntBASIC5.68□□□□□ -1.5
CTNNA1P35221 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.68□□□□□ -1.5
CTNNA1P35221 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CTNNA1P35221 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CTNNA1P35221 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 YES1P1-201ENST00000418510 1628 ntBASIC5.67□□□□□ -1.5
CTNNA1P35221 AC079298.1-201ENST00000625026 1619 ntBASIC5.67□□□□□ -1.5
CTNNA1P35221 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CTNNA1P35221 AC114786.1-201ENST00000512892 1415 ntBASIC5.67□□□□□ -1.5
CTNNA1P35221 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CTNNA1P35221 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms