Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 LDHAP1-201ENST00000509421 992 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AP001000.1-201ENST00000526843 742 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 MIR4502-201ENST00000580432 81 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC091167.5-201ENST00000605689 894 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 uc_338.29-201ENST00000615099 168 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC023421.1-201ENST00000590535 1785 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC022306.1-201ENST00000560489 1562 ntBASIC4.52□□□□□ -1.69
HLA-DMAP28067 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DMAP28067 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DMAP28067 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 OR7E25P-201ENST00000344844 931 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 RPS24P12-201ENST00000402084 394 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 NAP1L4P2-201ENST00000425958 899 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 BX323845.3-201ENST00000428215 527 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 NDUFS5P5-201ENST00000437256 321 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 AC064862.5-201ENST00000440618 334 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 PPIAP27-201ENST00000453800 265 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 AP000547.1-201ENST00000454360 617 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 RPL7P41-201ENST00000485823 957 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 ENPP7P9-201ENST00000514456 627 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 HMGB1P42-201ENST00000532126 553 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 IMMP1LP1-201ENST00000605170 488 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 AP002967.1-201ENST00000624203 539 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 AP000542.2-201ENST00000623199 6179 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 DHX9P1-201ENST00000436565 3076 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.51□□□□□ -1.69
HLA-DMAP28067 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DMAP28067 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DMAP28067 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 SSXP3-201ENST00000442971 1300 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 IFIT1P1-201ENST00000400497 1449 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 RNA5SP28-201ENST00000363841 119 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 RN7SKP6-201ENST00000364795 319 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AL589994.1-201ENST00000404962 340 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 AL139039.2-201ENST00000407436 479 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
HLA-DMAP28067 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DMAP28067 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DMAP28067 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms