Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.47□□□□□ -1.53
RETP07949 AC011933.2-201ENST00000578539 2790 ntBASIC5.47□□□□□ -1.53
RETP07949 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RETP07949 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.47□□□□□ -1.53
RETP07949 SNORA5.1-201ENST00000384275 131 ntBASIC5.47□□□□□ -1.53
RETP07949 RNA5SP487-201ENST00000410186 122 ntBASIC5.47□□□□□ -1.53
RETP07949 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 AC211486.3-201ENST00000412694 621 ntBASIC5.47□□□□□ -1.53
RETP07949 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 PRUNEP1-201ENST00000425846 705 ntBASIC5.47□□□□□ -1.53
RETP07949 C4BPAP2-201ENST00000428434 478 ntBASIC5.47□□□□□ -1.53
RETP07949 AL136231.1-201ENST00000429407 730 ntBASIC5.47□□□□□ -1.53
RETP07949 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.47□□□□□ -1.53
RETP07949 GAPDHP14-201ENST00000450472 937 ntBASIC5.47□□□□□ -1.53
RETP07949 SNORD125-201ENST00000459538 96 ntBASIC5.47□□□□□ -1.53
RETP07949 RN7SL385P-201ENST00000468873 276 ntBASIC5.47□□□□□ -1.53
RETP07949 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 RNU6-941P-201ENST00000516346 108 ntBASIC5.47□□□□□ -1.53
RETP07949 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 AC005000.1-201ENST00000536192 288 ntBASIC5.47□□□□□ -1.53
RETP07949 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RETP07949 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 EDDM3DP-201ENST00000554692 434 ntBASIC5.47□□□□□ -1.53
RETP07949 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.47□□□□□ -1.53
RETP07949 MIR4311-201ENST00000580794 100 ntBASIC5.47□□□□□ -1.53
RETP07949 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.47□□□□□ -1.53
RETP07949 AL023583.1-201ENST00000607518 1143 ntBASIC5.47□□□□□ -1.53
RETP07949 MIR6133-201ENST00000617057 108 ntBASIC5.47□□□□□ -1.53
RETP07949 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.47□□□□□ -1.53
RETP07949 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RETP07949 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RETP07949 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RETP07949 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RETP07949 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RETP07949 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.47□□□□□ -1.53
RETP07949 AL078621.3-201ENST00000623707 2042 ntBASIC5.47□□□□□ -1.53
RETP07949 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RETP07949 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RETP07949 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RETP07949 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.46□□□□□ -1.53
RETP07949 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.53
RETP07949 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 BCORP1-203ENST00000513194 5093 ntBASIC5.46□□□□□ -1.54
RETP07949 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.46□□□□□ -1.54
RETP07949 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RETP07949 MIR130A-201ENST00000385274 89 ntBASIC5.46□□□□□ -1.54
RETP07949 SEPT7P2-202ENST00000398921 823 ntBASIC5.46□□□□□ -1.54
RETP07949 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.46□□□□□ -1.54
RETP07949 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.46□□□□□ -1.54
RETP07949 AL138878.2-201ENST00000440581 1241 ntBASIC5.46□□□□□ -1.54
RETP07949 TPT1P12-201ENST00000448968 492 ntBASIC5.46□□□□□ -1.54
RETP07949 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.46□□□□□ -1.54
RETP07949 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.46□□□□□ -1.54
RETP07949 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.46□□□□□ -1.54
RETP07949 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.46□□□□□ -1.54
RETP07949 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
RETP07949 AC015864.1-201ENST00000496512 544 ntBASIC5.46□□□□□ -1.54
RETP07949 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.46□□□□□ -1.54
RETP07949 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.46□□□□□ -1.54
RETP07949 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.46□□□□□ -1.54
RETP07949 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.46□□□□□ -1.54
RETP07949 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.46□□□□□ -1.54
RETP07949 RBM22P1-201ENST00000578589 1214 ntBASIC5.46□□□□□ -1.54
RETP07949 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
RETP07949 AC234771.5-201ENST00000600161 514 ntBASIC5.46□□□□□ -1.54
RETP07949 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.46□□□□□ -1.54
RETP07949 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.46□□□□□ -1.54
RETP07949 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
RETP07949 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RETP07949 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RETP07949 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.46□□□□□ -1.54
RETP07949 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RETP07949 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RETP07949 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RETP07949 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RETP07949 INTS6P1-201ENST00000504674 2530 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms