Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.56□□□□□ -1.52
APOA4P06727 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.56□□□□□ -1.52
APOA4P06727 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.56□□□□□ -1.52
APOA4P06727 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.56□□□□□ -1.52
APOA4P06727 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.56□□□□□ -1.52
APOA4P06727 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.56□□□□□ -1.52
APOA4P06727 AC012467.1-201ENST00000607740 256 ntBASIC5.56□□□□□ -1.52
APOA4P06727 AC239803.2-201ENST00000610161 430 ntBASIC5.56□□□□□ -1.52
APOA4P06727 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.56□□□□□ -1.52
APOA4P06727 MIR193BHG-214ENST00000641765 509 ntBASIC5.56□□□□□ -1.52
APOA4P06727 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.56□□□□□ -1.52
APOA4P06727 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
APOA4P06727 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.56□□□□□ -1.52
APOA4P06727 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.56□□□□□ -1.52
APOA4P06727 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.56□□□□□ -1.52
APOA4P06727 AL359715.3-201ENST00000569267 2123 ntBASIC5.56□□□□□ -1.52
APOA4P06727 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
APOA4P06727 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.56□□□□□ -1.52
APOA4P06727 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA4P06727 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 ZNF733P-202ENST00000444809 1573 ntBASIC5.55□□□□□ -1.52
APOA4P06727 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 AC091305.2-201ENST00000624049 1576 ntBASIC5.55□□□□□ -1.52
APOA4P06727 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 PWAR1-201ENST00000624188 2414 ntBASIC5.55□□□□□ -1.52
APOA4P06727 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 RNA5SP284-201ENST00000384547 118 ntBASIC5.55□□□□□ -1.52
APOA4P06727 RNU6-225P-201ENST00000384613 103 ntBASIC5.55□□□□□ -1.52
APOA4P06727 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 MTND3P20-201ENST00000407663 186 ntBASIC5.55□□□□□ -1.52
APOA4P06727 RN7SKP222-201ENST00000410651 315 ntBASIC5.55□□□□□ -1.52
APOA4P06727 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA4P06727 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA4P06727 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA4P06727 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA4P06727 BX119321.1-201ENST00000428912 797 ntBASIC5.55□□□□□ -1.52
APOA4P06727 MTCYBP12-201ENST00000440559 1134 ntBASIC5.55□□□□□ -1.52
APOA4P06727 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA4P06727 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA4P06727 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA4P06727 RPL10P17-201ENST00000453852 316 ntBASIC5.55□□□□□ -1.52
APOA4P06727 AP000797.2-201ENST00000475768 606 ntBASIC5.55□□□□□ -1.52
APOA4P06727 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 DUTP7-201ENST00000507982 486 ntBASIC5.55□□□□□ -1.52
APOA4P06727 SNORD46.2-201ENST00000516021 102 ntBASIC5.55□□□□□ -1.52
APOA4P06727 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA4P06727 MRPS16P1-201ENST00000523462 412 ntBASIC5.55□□□□□ -1.52
APOA4P06727 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 DPPA2P4-201ENST00000563717 878 ntBASIC5.55□□□□□ -1.52
APOA4P06727 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.55□□□□□ -1.52
APOA4P06727 AC010503.3-201ENST00000594355 540 ntBASIC5.55□□□□□ -1.52
APOA4P06727 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA4P06727 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA4P06727 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA4P06727 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.55□□□□□ -1.52
APOA4P06727 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.55□□□□□ -1.52
APOA4P06727 AC119674.1-212ENST00000641155 993 ntBASIC5.55□□□□□ -1.52
APOA4P06727 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOA4P06727 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
APOA4P06727 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.55□□□□□ -1.52
APOA4P06727 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
APOA4P06727 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOA4P06727 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOA4P06727 RNU6-532P-201ENST00000384318 107 ntBASIC5.54□□□□□ -1.52
APOA4P06727 EI24P3-201ENST00000399046 1062 ntBASIC5.54□□□□□ -1.52
APOA4P06727 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.54□□□□□ -1.52
APOA4P06727 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.54□□□□□ -1.52
APOA4P06727 PCNPP2-201ENST00000441651 455 ntBASIC5.54□□□□□ -1.52
APOA4P06727 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.54□□□□□ -1.52
APOA4P06727 AC005297.1-201ENST00000444765 862 ntBASIC5.54□□□□□ -1.52
APOA4P06727 AZGP1P2-201ENST00000454506 345 ntBASIC5.54□□□□□ -1.52
APOA4P06727 TAAR4P-201ENST00000454843 1039 ntBASIC5.54□□□□□ -1.52
APOA4P06727 RN7SL72P-201ENST00000460697 269 ntBASIC5.54□□□□□ -1.52
APOA4P06727 AC007998.1-201ENST00000474156 672 ntBASIC5.54□□□□□ -1.52
APOA4P06727 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms