Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SS18L2P2-201ENST00000583960 235 ntBASIC6□□□□□ -1.45
COL2A1P02458 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6□□□□□ -1.45
COL2A1P02458 AL392048.1-201ENST00000613946 534 ntBASIC6□□□□□ -1.45
COL2A1P02458 AL162574.1-201ENST00000615702 950 ntBASIC6□□□□□ -1.45
COL2A1P02458 AL355834.1-201ENST00000556602 3965 ntBASIC6□□□□□ -1.45
COL2A1P02458 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6□□□□□ -1.45
COL2A1P02458 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL2A1P02458 BX284613.1-201ENST00000452221 1641 ntBASIC6□□□□□ -1.45
COL2A1P02458 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6□□□□□ -1.45
COL2A1P02458 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.99□□□□□ -1.45
COL2A1P02458 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.99□□□□□ -1.45
COL2A1P02458 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 SNORA2.3-201ENST00000383920 135 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 ATP5HP3-201ENST00000396994 486 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 RN7SKP27-201ENST00000410684 333 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 CYP4F29P-201ENST00000420685 446 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.99□□□□□ -1.45
COL2A1P02458 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
COL2A1P02458 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 RN7SL443P-201ENST00000464331 290 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 RPS23P7-201ENST00000466210 444 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 MRPS33P2-201ENST00000507850 322 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL2A1P02458 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.99□□□□□ -1.45
COL2A1P02458 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.99□□□□□ -1.45
COL2A1P02458 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.99□□□□□ -1.45
COL2A1P02458 AL161616.1-201ENST00000611867 286 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 AL352984.2-202ENST00000613699 155 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.99□□□□□ -1.45
COL2A1P02458 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.99□□□□□ -1.45
COL2A1P02458 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
COL2A1P02458 SNX18P3-202ENST00000565670 1750 ntBASIC5.99□□□□□ -1.45
COL2A1P02458 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
COL2A1P02458 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.98□□□□□ -1.45
COL2A1P02458 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.98□□□□□ -1.45
COL2A1P02458 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
COL2A1P02458 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.98□□□□□ -1.45
COL2A1P02458 AC007064.3-201ENST00000422608 359 ntBASIC5.98□□□□□ -1.45
COL2A1P02458 TCEA1P1-201ENST00000449716 880 ntBASIC5.98□□□□□ -1.45
COL2A1P02458 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.98□□□□□ -1.45
COL2A1P02458 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.98□□□□□ -1.45
COL2A1P02458 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.98□□□□□ -1.45
COL2A1P02458 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.98□□□□□ -1.45
COL2A1P02458 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.98□□□□□ -1.45
COL2A1P02458 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.98□□□□□ -1.45
COL2A1P02458 CFTRP2-201ENST00000634304 199 ntBASIC5.98□□□□□ -1.45
COL2A1P02458 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.98□□□□□ -1.45
COL2A1P02458 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.98□□□□□ -1.45
COL2A1P02458 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.98□□□□□ -1.45
COL2A1P02458 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
COL2A1P02458 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.98□□□□□ -1.45
COL2A1P02458 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.98□□□□□ -1.45
COL2A1P02458 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
COL2A1P02458 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
COL2A1P02458 RNA5SP223-201ENST00000365174 120 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 SNORA70.6-201ENST00000383934 134 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 RPL10P10-201ENST00000403509 664 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 P2RY10P2-201ENST00000416730 913 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.97□□□□□ -1.45
COL2A1P02458 AC046176.1-201ENST00000435260 1170 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 RPL5P25-201ENST00000441148 775 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.97□□□□□ -1.45
COL2A1P02458 RN7SL244P-201ENST00000493405 297 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.97□□□□□ -1.45
COL2A1P02458 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.97□□□□□ -1.45
COL2A1P02458 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.97□□□□□ -1.45
COL2A1P02458 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.97□□□□□ -1.45
COL2A1P02458 AC091042.1-201ENST00000579213 173 ntBASIC5.97□□□□□ -1.45
COL2A1P02458 MIR4270-201ENST00000581799 70 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms