Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
UPK1BO75841 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1BO75841 RNU2-18P-201ENST00000411224 162 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1BO75841 ATG4AP1-201ENST00000416893 538 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 AL161742.1-201ENST00000418154 584 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 QRSL1P2-201ENST00000418582 964 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 BX284632.2-201ENST00000421091 399 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 RGS17P1-201ENST00000423358 553 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 VN1R20P-201ENST00000425215 966 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 RBMY2JP-201ENST00000425544 1059 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1BO75841 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1BO75841 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1BO75841 AL512605.1-202ENST00000441919 381 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 AL359955.2-201ENST00000445380 353 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1BO75841 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 H3F3AP5-201ENST00000475267 429 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 HMGB1P44-201ENST00000508597 572 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1BO75841 SCARNA18.1-201ENST00000516330 83 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1BO75841 MRPS16P1-201ENST00000523462 412 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 DYNLL1P4-201ENST00000549314 266 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1BO75841 RPA2P1-201ENST00000556557 721 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 AC092332.1-201ENST00000563684 829 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1BO75841 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.38□□□□□ -1.71
UPK1BO75841 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.38□□□□□ -1.71
UPK1BO75841 AP005432.2-201ENST00000608162 586 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1BO75841 MIR6762-201ENST00000613340 86 ntBASIC4.38□□□□□ -1.71
UPK1BO75841 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1BO75841 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1BO75841 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1BO75841 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1BO75841 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.38□□□□□ -1.71
UPK1BO75841 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
UPK1BO75841 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPK1BO75841 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 CUL4AP1-201ENST00000514750 1863 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AC027279.1-201ENST00000568885 4284 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 RNA5SP427-201ENST00000365323 119 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 RNA5SP131-201ENST00000365452 119 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 SNORA16A-201ENST00000384342 137 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 MIR137-201ENST00000385223 102 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 U3.35-201ENST00000408405 208 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 RNA5SP198-201ENST00000410376 127 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 RNU2-5P-201ENST00000410533 180 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 SDHDP6-201ENST00000414693 480 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1BO75841 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 PTP4A1P1-201ENST00000420539 515 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 SETP10-201ENST00000424368 814 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.37□□□□□ -1.71
UPK1BO75841 GSTM5P1-201ENST00000434751 660 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AC009244.1-201ENST00000450566 258 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AP000547.1-201ENST00000454360 617 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.37□□□□□ -1.71
UPK1BO75841 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 HMGB3P13-201ENST00000511263 607 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 HMGN1P17-201ENST00000513734 295 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 RNA5SP154-201ENST00000516193 111 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 AC068408.1-201ENST00000577406 1144 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 COX6CP4-201ENST00000605798 228 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.37□□□□□ -1.71
UPK1BO75841 MIR6793-201ENST00000612376 63 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 AC004801.6-201ENST00000616571 978 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 AL121985.3-201ENST00000620690 523 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.37□□□□□ -1.71
UPK1BO75841 AL355480.4-201ENST00000626823 69 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 AC245100.2-201ENST00000454544 1679 ntBASIC4.37□□□□□ -1.71
UPK1BO75841 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.37□□□□□ -1.71
UPK1BO75841 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPK1BO75841 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms