Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 Y_RNA.688-201ENST00000516565 95 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.74□□□□□ -1.49
PROM1O43490 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 AC104229.1-201ENST00000561364 255 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 AC119403.2-201ENST00000590960 598 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC005252.1-201ENST00000604518 1063 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL139344.1-201ENST00000605228 195 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC092681.3-201ENST00000609463 678 ntBASIC5.74□□□□□ -1.49
PROM1O43490 PART1_2.1-201ENST00000612397 250 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL512652.1-201ENST00000619006 500 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL035461.2-201ENST00000619201 524 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.74□□□□□ -1.49
PROM1O43490 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.74□□□□□ -1.49
PROM1O43490 AL512506.2-201ENST00000624472 458 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC019080.5-201ENST00000624891 757 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AL121594.5-201ENST00000631724 573 ntBASIC5.74□□□□□ -1.49
PROM1O43490 MIR4302-201ENST00000638058 60 ntBASIC5.74□□□□□ -1.49
PROM1O43490 BX649567.1-201ENST00000642071 1134 ntBASIC5.74□□□□□ -1.49
PROM1O43490 MTND4P8-201ENST00000514997 1362 ntBASIC5.74□□□□□ -1.49
PROM1O43490 AC104966.1-201ENST00000467010 1464 ntBASIC5.74□□□□□ -1.49
PROM1O43490 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.74□□□□□ -1.49
PROM1O43490 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.74□□□□□ -1.49
PROM1O43490 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 AC004656.1-201ENST00000568479 4951 ntBASIC5.74□□□□□ -1.49
PROM1O43490 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.74□□□□□ -1.49
PROM1O43490 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PROM1O43490 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 RBMY1HP-201ENST00000382759 1389 ntBASIC5.73□□□□□ -1.49
PROM1O43490 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PROM1O43490 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 GSTA12P-201ENST00000402398 508 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AL132875.1-201ENST00000403623 949 ntBASIC5.73□□□□□ -1.49
PROM1O43490 RPS24P7-201ENST00000416921 246 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 MTCYBP7-201ENST00000419540 1134 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 MRPS21P2-201ENST00000424704 264 ntBASIC5.73□□□□□ -1.49
PROM1O43490 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.73□□□□□ -1.49
PROM1O43490 BX119904.1-201ENST00000432026 348 ntBASIC5.73□□□□□ -1.49
PROM1O43490 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 AC023141.3-201ENST00000436698 278 ntBASIC5.73□□□□□ -1.49
PROM1O43490 TRIM60P16-201ENST00000444048 694 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 AC113420.1-201ENST00000507903 571 ntBASIC5.73□□□□□ -1.49
PROM1O43490 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.73□□□□□ -1.49
PROM1O43490 AC147055.3-201ENST00000510547 851 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AC109464.1-201ENST00000511091 819 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 SCARNA21.2-201ENST00000516600 166 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 AP000619.2-201ENST00000546014 969 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 AL442163.2-201ENST00000553912 710 ntBASIC5.73□□□□□ -1.49
PROM1O43490 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PROM1O43490 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.73□□□□□ -1.49
PROM1O43490 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.73□□□□□ -1.49
PROM1O43490 AC073137.1-201ENST00000605636 634 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AL645933.2-201ENST00000606743 1207 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AC245008.1-201ENST00000608123 476 ntBASIC5.73□□□□□ -1.49
PROM1O43490 AC245100.7-201ENST00000609678 442 ntBASIC5.73□□□□□ -1.49
PROM1O43490 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 VN1R9P-201ENST00000614184 867 ntBASIC5.73□□□□□ -1.49
PROM1O43490 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 FAM27E2-201ENST00000619668 403 ntBASIC5.73□□□□□ -1.49
PROM1O43490 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.73□□□□□ -1.49
PROM1O43490 AL357562.1-201ENST00000624911 609 ntBASIC5.73□□□□□ -1.49
PROM1O43490 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.73□□□□□ -1.49
PROM1O43490 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 223.7 ms