Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.34□□□□□ -1.71
SDCBPO00560 MIR323A-201ENST00000362199 86 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SDCBPO00560 RNU1-149P-201ENST00000390870 161 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 OR8V1P-201ENST00000395193 873 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AL391422.1-201ENST00000402155 436 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AL513325.1-201ENST00000417716 1034 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AC104843.2-201ENST00000427666 297 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.34□□□□□ -1.71
SDCBPO00560 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 RPL35AP21-201ENST00000437667 333 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 CYCSP12-201ENST00000437729 300 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.34□□□□□ -1.71
SDCBPO00560 PCNPP2-201ENST00000441651 455 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 MRPL35P2-201ENST00000448009 511 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AL133445.1-201ENST00000467051 452 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 RPEP1-201ENST00000504507 658 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.34□□□□□ -1.71
SDCBPO00560 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.34□□□□□ -1.71
SDCBPO00560 UGT2A3P7-201ENST00000510485 734 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.34□□□□□ -1.71
SDCBPO00560 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.34□□□□□ -1.71
SDCBPO00560 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.34□□□□□ -1.71
SDCBPO00560 AC090888.3-201ENST00000558917 509 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.34□□□□□ -1.71
SDCBPO00560 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 AC008814.1-201ENST00000603797 406 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AL589674.2-201ENST00000604304 337 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 WBP1LP8-201ENST00000617401 327 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AC026124.2-201ENST00000621847 656 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 AL353684.1-201ENST00000622677 1120 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.34□□□□□ -1.71
SDCBPO00560 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
SDCBPO00560 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SDCBPO00560 AL731566.1-201ENST00000620490 1937 ntBASIC4.34□□□□□ -1.71
SDCBPO00560 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SDCBPO00560 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC011447.7-201ENST00000624228 1590 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SDCBPO00560 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 RNA5SP339-201ENST00000390987 122 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 RPL6P21-201ENST00000418672 846 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC009238.2-201ENST00000431026 355 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 SUMO2P8-201ENST00000434672 286 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.33□□□□□ -1.72
SDCBPO00560 RPL7AP61-201ENST00000443410 636 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 BTF3P6-201ENST00000448054 499 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC007386.1-201ENST00000455212 582 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC093166.2-201ENST00000455969 1017 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 SETP20-201ENST00000457046 852 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 RNA5SP103-201ENST00000459503 118 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.33□□□□□ -1.72
SDCBPO00560 RNA5SP303-201ENST00000516192 130 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.33□□□□□ -1.72
SDCBPO00560 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.33□□□□□ -1.72
SDCBPO00560 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 RPL10P14-201ENST00000565265 298 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.33□□□□□ -1.72
SDCBPO00560 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 AC015914.2-201ENST00000618167 288 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC118658.2-201ENST00000618697 459 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 AL672167.1-205ENST00000641112 3080 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 AC005261.2-201ENST00000593427 4258 ntBASIC4.33□□□□□ -1.72
SDCBPO00560 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDCBPO00560 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.33□□□□□ -1.72
SDCBPO00560 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SDCBPO00560 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms