Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 OR8Q1P-201ENST00000526467 655 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 AP003066.2-201ENST00000529375 555 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 AC107958.1-201ENST00000556576 290 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.08□□□□□ -1.44
FOXN3O00409 AC104229.1-201ENST00000561364 255 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 DPPA2P4-201ENST00000563717 878 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.08□□□□□ -1.44
FOXN3O00409 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXN3O00409 MIR4271-201ENST00000582451 67 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXN3O00409 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXN3O00409 AC034236.3-201ENST00000605999 461 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXN3O00409 AC021851.1-201ENST00000608537 1082 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 AC006840.1-201ENST00000623069 542 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 AP003485.1-201ENST00000625093 753 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXN3O00409 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
FOXN3O00409 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
FOXN3O00409 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXN3O00409 PWAR1-201ENST00000624188 2414 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
FOXN3O00409 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXN3O00409 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
FOXN3O00409 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.08□□□□□ -1.44
FOXN3O00409 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.08□□□□□ -1.44
FOXN3O00409 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXN3O00409 AL353796.1-201ENST00000561542 3241 ntBASIC6.08□□□□□ -1.44
FOXN3O00409 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXN3O00409 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 AC008432.1-201ENST00000615912 1320 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
FOXN3O00409 AL121886.1-201ENST00000358609 435 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 RNA5SP453-201ENST00000362503 119 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
FOXN3O00409 MIR142-201ENST00000384835 87 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AL355615.1-201ENST00000406187 641 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXN3O00409 AL158825.1-201ENST00000414735 521 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC008173.1-201ENST00000418901 264 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AK4P4-201ENST00000419465 646 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 RPL23AP4-201ENST00000427757 463 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC099670.2-201ENST00000435130 321 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXN3O00409 DNAJA1P5-201ENST00000440278 943 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXN3O00409 PSMC1P13-201ENST00000458195 985 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 SNORD125-201ENST00000459538 96 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXN3O00409 RPS17P5-201ENST00000498293 408 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXN3O00409 AC111000.6-201ENST00000514471 709 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.07□□□□□ -1.44
FOXN3O00409 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXN3O00409 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXN3O00409 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXN3O00409 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXN3O00409 AGGF1P9-201ENST00000561884 913 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC106730.2-201ENST00000566641 540 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC092121.1-201ENST00000569452 202 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC6.07□□□□□ -1.44
FOXN3O00409 AL499605.1-201ENST00000604628 403 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC108865.2-201ENST00000606881 432 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC090912.3-201ENST00000609775 533 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 AC090607.5-201ENST00000615692 224 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 AL137141.1-201ENST00000624622 4836 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.07□□□□□ -1.44
FOXN3O00409 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 AP002512.4-202ENST00000641599 4530 ntBASIC6.07□□□□□ -1.44
FOXN3O00409 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
FOXN3O00409 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.07□□□□□ -1.44
FOXN3O00409 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 NEPNP-201ENST00000404786 1371 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXN3O00409 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
FOXN3O00409 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXN3O00409 AC097461.1-201ENST00000568928 2821 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 GAPDHP24-201ENST00000328713 983 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
FOXN3O00409 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXN3O00409 SNORA64.1-201ENST00000362600 132 ntBASIC6.06□□□□□ -1.44
FOXN3O00409 RN7SKP185-201ENST00000362813 326 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms