Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPK1AO00322 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
UPK1AO00322 PCAT14-202ENST00000627127 3935 ntBASIC4.88□□□□□ -1.63
UPK1AO00322 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
UPK1AO00322 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.87□□□□□ -1.63
UPK1AO00322 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 RNA5SP435-201ENST00000364044 108 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 RNA5SP90-201ENST00000364801 99 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 RNA5SP223-201ENST00000365174 120 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 RN7SKP206-201ENST00000410823 293 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 NPM1P4-201ENST00000414095 812 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.87□□□□□ -1.63
UPK1AO00322 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 AC011225.1-201ENST00000457751 369 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.87□□□□□ -1.63
UPK1AO00322 RPS4XP20-201ENST00000505751 772 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 AC012400.1-201ENST00000518452 381 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.87□□□□□ -1.63
UPK1AO00322 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.87□□□□□ -1.63
UPK1AO00322 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.87□□□□□ -1.63
UPK1AO00322 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.87□□□□□ -1.63
UPK1AO00322 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.87□□□□□ -1.63
UPK1AO00322 AC118658.2-201ENST00000618697 459 ntBASIC4.87□□□□□ -1.63
UPK1AO00322 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.87□□□□□ -1.63
UPK1AO00322 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPK1AO00322 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UPK1AO00322 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
UPK1AO00322 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
UPK1AO00322 RN7SKP162-201ENST00000363605 345 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 AC013442.1-201ENST00000397347 228 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 EI24P3-201ENST00000399046 1062 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 RPS29P10-201ENST00000439197 166 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 MRPL35P2-201ENST00000448009 511 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 Z92846.1-201ENST00000456203 268 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 RPS4XP12-201ENST00000461747 709 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 AC106872.4-201ENST00000510050 523 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.86□□□□□ -1.63
UPK1AO00322 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 BNIP3P1-201ENST00000547295 580 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 AL049779.2-201ENST00000553847 315 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
UPK1AO00322 AP005131.7-201ENST00000610087 611 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.86□□□□□ -1.63
UPK1AO00322 AC090527.3-201ENST00000619041 548 ntBASIC4.86□□□□□ -1.63
UPK1AO00322 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
UPK1AO00322 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.86□□□□□ -1.63
UPK1AO00322 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
UPK1AO00322 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
UPK1AO00322 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPK1AO00322 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
UPK1AO00322 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.86□□□□□ -1.63
UPK1AO00322 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.86□□□□□ -1.63
UPK1AO00322 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
UPK1AO00322 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
UPK1AO00322 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1AO00322 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
UPK1AO00322 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1AO00322 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.85□□□□□ -1.63
UPK1AO00322 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
UPK1AO00322 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPK1AO00322 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.85□□□□□ -1.63
UPK1AO00322 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.85□□□□□ -1.63
UPK1AO00322 EI24P4-201ENST00000423683 1078 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms