Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 SNORD37.1-201ENST00000390968 65 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 TDGF1P4-201ENST00000401555 520 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RGS17P1-201ENST00000423358 553 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 OR2AS1P-201ENST00000427827 319 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC097527.1-201ENST00000437031 530 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 MTCO3P45-201ENST00000443036 613 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC104651.2-201ENST00000447549 528 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ELOBP1-201ENST00000447693 357 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 BX248409.1-201ENST00000455497 255 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 VN1R6P-201ENST00000458417 907 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 PFN1P6-201ENST00000476786 399 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AL449212.1-201ENST00000499853 517 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 OR52H2P-201ENST00000514607 902 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RN7SKP24-201ENST00000515888 284 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-150P-201ENST00000516237 95 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-1308P-201ENST00000516817 103 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC007751.2-201ENST00000534173 291 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC138123.3-201ENST00000551928 791 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC233290.2-201ENST00000552852 390 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AL162632.2-201ENST00000553933 399 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AL121579.2-201ENST00000555466 590 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 UBE2Q2P11-201ENST00000559691 205 ntBASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 FLII-230ENST00000628188 156 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS9D1Q9Y2B5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AL353807.3-201ENST00000500626 2505 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 EEF1A1P13-201ENST00000503537 1389 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 Y_RNA.252-201ENST00000364556 101 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 SNORD113-1-201ENST00000365321 69 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-108P-201ENST00000365558 107 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 SNORA30-201ENST00000384028 129 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 RNU6-187P-201ENST00000384139 106 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 RNY1P14-201ENST00000384426 108 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 MIR514A2-201ENST00000385131 88 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 MIR514A3-201ENST00000385132 88 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 UQCRBP1-201ENST00000421129 336 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 RPL34P27-201ENST00000428810 349 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 SETP5-201ENST00000437270 562 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 ACTP1-201ENST00000440793 383 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 OR7H1P-201ENST00000448965 922 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 RN7SL854P-201ENST00000459767 295 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AC026784.1-201ENST00000507986 352 ntBASIC8□□□□□ -1.13
VPS9D1Q9Y2B5 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms