Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC092747.4-201ENST00000620519 1861 ntBASIC4.86□□□□□ -1.63
CHD8Q9HCK8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AP003175.1-201ENST00000641383 6658 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AP003972.1-201ENST00000625192 5446 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 MIR449B-201ENST00000384995 97 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 BX510359.2-201ENST00000417920 305 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AL359757.2-201ENST00000624309 274 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 SMG1P7-201ENST00000565246 2704 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AC015813.6-201ENST00000624409 5808 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AL021331.1-201ENST00000402817 582 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 RSU1P3-201ENST00000412878 835 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AL137845.2-201ENST00000444292 988 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AC008782.1-201ENST00000603386 430 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 CR381572.2-201ENST00000624852 397 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 SCARNA15.3-201ENST00000626315 122 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 SCARNA4.1-201ENST00000628597 123 ntBASIC4.85□□□□□ -1.63
CHD8Q9HCK8 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CHD8Q9HCK8 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 PARP4P1-201ENST00000435945 2337 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 RNU1-13P-201ENST00000384499 162 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 TRAV35-201ENST00000390462 330 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 KRT8P51-201ENST00000438938 274 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 RPS29P10-201ENST00000439197 166 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 TAAR4P-201ENST00000454843 1039 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 RPS7P6-201ENST00000485777 579 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AL121594.2-201ENST00000541658 472 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 OR4H6P-201ENST00000563771 921 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AC106782.4-201ENST00000568264 210 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AC108751.5-201ENST00000492880 1336 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHD8Q9HCK8 AC104162.1-201ENST00000430831 2382 ntBASIC4.84□□□□□ -1.63
CHD8Q9HCK8 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 RPL21P108-201ENST00000413857 481 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 TMX2P1-201ENST00000436507 708 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 CYCSP34-201ENST00000458172 304 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 TRBV5-2-201ENST00000489095 273 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AC005341.1-201ENST00000571086 708 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 ZNF969P-201ENST00000510345 2341 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 AC006600.2-201ENST00000624834 2506 ntBASIC4.84□□□□□ -1.64
CHD8Q9HCK8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.84□□□□□ -1.64
CHD8Q9HCK8 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHD8Q9HCK8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms