Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC027228.2-201ENST00000567141 2154 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 IFIT1P1-201ENST00000400497 1449 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC092681.1-201ENST00000297369 291 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RNA5SP326-201ENST00000363209 110 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RN7SKP275-201ENST00000364626 301 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RN7SKP187-201ENST00000365536 330 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 MOB1AP2-201ENST00000446060 614 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 PSAT1P4-201ENST00000466500 526 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RN7SL188P-201ENST00000469842 285 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RN7SL170P-201ENST00000487098 295 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RN7SKP253-201ENST00000516424 309 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC104072.1-201ENST00000568817 668 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 SS18L2P2-201ENST00000583960 235 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 BNIP3P27-201ENST00000599991 412 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC024023.1-201ENST00000624530 922 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BRF2Q9HAW0 AC083899.2-201ENST00000423285 1376 ntBASIC5.42□□□□□ -1.54
BRF2Q9HAW0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 TTC39DP-201ENST00000416781 1688 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 LINC01963-201ENST00000562038 3148 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 MIR16-2-201ENST00000362117 81 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RNA5SP433-201ENST00000364491 114 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RPS3AP2-201ENST00000407190 754 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RN7SKP222-201ENST00000410651 315 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL606495.1-201ENST00000422100 813 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 MTND2P2-201ENST00000434633 945 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC110602.1-201ENST00000437414 318 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RPS27P5-201ENST00000444247 244 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL596266.1-201ENST00000448132 400 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RNU6-334P-201ENST00000517072 102 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 MIR4271-201ENST00000582451 67 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 H3F3BP2-201ENST00000583907 357 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 ABI1P1-201ENST00000603375 1120 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC005034.4-201ENST00000603612 899 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC079610.2-201ENST00000604818 690 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL139124.1-201ENST00000609123 421 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 MIR6780B-201ENST00000610307 79 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AC018926.1-201ENST00000616335 435 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 RNA5SP439-201ENST00000617595 124 ntBASIC5.41□□□□□ -1.54
BRF2Q9HAW0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.41□□□□□ -1.54
BRF2Q9HAW0 AP000943.4-201ENST00000622912 357 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms