Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 MTATP6P1-201ENST00000514057 681 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 RNU4-18P-201ENST00000516751 149 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC009852.2-201ENST00000567898 485 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 MIR3614-201ENST00000581261 86 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AL162431.4-201ENST00000604674 411 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC103703.1-201ENST00000634783 663 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 AC074101.1-201ENST00000637861 241 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 TRIM51GP-201ENST00000534741 1350 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 TTC39DP-201ENST00000416781 1688 ntBASIC5.37□□□□□ -1.55
LRRC40Q9H9A6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC026523.2-201ENST00000625039 7739 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 SNORA17A-201ENST00000391185 133 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 RPL21P67-201ENST00000402896 478 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 OR4K12P-201ENST00000406538 961 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC104843.2-201ENST00000427666 297 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC079807.1-201ENST00000429993 481 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC104634.1-201ENST00000452720 462 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 EIF3LP3-201ENST00000495197 822 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 FTH1P11-201ENST00000517577 551 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC022616.2-201ENST00000523185 300 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC090888.3-201ENST00000558917 509 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC106730.2-201ENST00000566641 540 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 RN7SL708P-201ENST00000580952 299 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 SUGT1P3-202ENST00000604259 383 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC011626.1-201ENST00000604710 562 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 AC008833.1-201ENST00000611633 691 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 MTCO1P1-201ENST00000624263 1081 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 SNORA17.5-201ENST00000630429 132 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 SAMMSON-209ENST00000641222 1100 ntBASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
LRRC40Q9H9A6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC104623.2-202ENST00000623477 4002 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 SMG1P7-201ENST00000565246 2704 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 AC006210.2-201ENST00000367074 1545 ntBASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRC40Q9H9A6 RN7SKP15-201ENST00000364742 309 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms