Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 HSPD1P8-201ENST00000400121 1658 ntBASIC6.81□□□□□ -1.32
RTFDC1Q9BY42 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 SNORA67-201ENST00000384423 137 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC136624.1-201ENST00000400791 413 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 NPM1P37-201ENST00000403105 874 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 RN7SKP279-201ENST00000411383 298 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AL353898.1-201ENST00000444055 238 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC073850.1-201ENST00000449243 255 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 RPL7P6-201ENST00000480903 738 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC112518.2-201ENST00000508565 425 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 RN7SKP99-201ENST00000517028 307 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC078899.1-201ENST00000521432 1185 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 MIR4436B2-201ENST00000581415 91 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 MIR4436B1-201ENST00000583272 91 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC104785.1-201ENST00000603220 588 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC017076.1-201ENST00000607613 578 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC090527.3-201ENST00000619041 548 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AP002799.1-201ENST00000623552 423 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AP003476.1-201ENST00000623984 516 ntBASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RTFDC1Q9BY42 AC011493.1-201ENST00000596753 1632 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 RNU6-31P-201ENST00000384388 108 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AL034403.1-201ENST00000399414 885 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 DUTP5-201ENST00000406790 469 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AL772161.1-201ENST00000439130 476 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC092106.1-201ENST00000444291 373 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 RPL5P13-201ENST00000462840 709 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 RPS18P6-201ENST00000476880 458 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 RNU6-334P-201ENST00000517072 102 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 SCARNA1-201ENST00000517138 166 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 CBX3P2-202ENST00000583365 535 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC068020.1-201ENST00000594215 661 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC130352.1-201ENST00000602979 661 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC084373.1-201ENST00000603311 235 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 NANOGP3-201ENST00000605855 286 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC009163.6-201ENST00000612367 342 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 MIR8084-201ENST00000614105 89 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 OR8G7P-201ENST00000616658 848 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC109583.2-201ENST00000617367 129 ntBASIC6.79□□□□□ -1.32
RTFDC1Q9BY42 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms