Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC009597.2-201ENST00000604659 592 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 MIR6737-201ENST00000617385 70 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 MAPK10-349ENST00000641767 3661 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 NEPNP-201ENST00000404786 1371 ntBASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC28BQ9BUN5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 MAPK10-320ENST00000641462 6696 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RN7SKP184-201ENST00000362348 333 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RNA5SP394-201ENST00000364216 119 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RNA5SP223-201ENST00000365174 120 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 SUGT1P2-201ENST00000379452 992 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 HMGB1P20-201ENST00000402555 677 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RN7SKP247-201ENST00000411094 308 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL133173.1-201ENST00000423458 397 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AMYP1-201ENST00000440059 1023 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL589765.3-201ENST00000446084 462 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC073587.1-201ENST00000447093 876 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC093166.3-201ENST00000448785 303 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC007688.1-201ENST00000475592 759 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC090686.1-201ENST00000481577 749 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC058823.1-201ENST00000485315 474 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC114781.3-201ENST00000512083 142 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC024940.3-201ENST00000538551 316 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC002310.3-201ENST00000569728 723 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC005341.1-201ENST00000571086 708 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RN7SL708P-201ENST00000580952 299 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL118522.2-201ENST00000616045 615 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AC129778.1-202ENST00000623812 261 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 MTCO1P1-201ENST00000624263 1081 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AP001052.1-201ENST00000626421 99 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL591379.1-207ENST00000635982 261 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 CR383656.5-201ENST00000547616 1340 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 AL450345.1-202ENST00000605741 3881 ntBASIC5.13□□□□□ -1.59
CCDC28BQ9BUN5 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 MIR375-201ENST00000362103 64 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 RNU2-22P-201ENST00000411266 212 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 TIMM8BP2-201ENST00000445940 251 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 LDHBP2-201ENST00000456969 1005 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 ACA64.1-201ENST00000459171 127 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 SNORA48.9-201ENST00000516419 162 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC105031.1-201ENST00000518550 476 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 MTND2P7-201ENST00000521337 640 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AC027369.2-201ENST00000528030 440 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 AP004607.2-201ENST00000533949 322 ntBASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC28BQ9BUN5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms