Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PKP4Q99569 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PKP4Q99569 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 AC006206.1-201ENST00000544842 3387 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.39□□□□□ -1.55
PKP4Q99569 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 SAMMSON-213ENST00000641336 1521 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 RNU4-7P-201ENST00000364758 141 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AL139039.2-201ENST00000407436 479 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 OR51A6P-201ENST00000418680 1004 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 RIMKLBP2-201ENST00000424737 654 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 CR848007.2-201ENST00000424918 787 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 FAR1P1-201ENST00000427163 934 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 RPL7P56-201ENST00000429441 717 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AC138761.5-201ENST00000433967 325 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 Z85994.2-201ENST00000434327 452 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 AP000281.1-201ENST00000444036 316 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.39□□□□□ -1.55
PKP4Q99569 YWHAEP1-201ENST00000453697 763 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AZGP1P2-201ENST00000454506 345 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.39□□□□□ -1.55
PKP4Q99569 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.39□□□□□ -1.55
PKP4Q99569 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.39□□□□□ -1.55
PKP4Q99569 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 ATG10-AS1-201ENST00000504846 648 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 RPS27AP18-201ENST00000515536 459 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.39□□□□□ -1.55
PKP4Q99569 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.39□□□□□ -1.55
PKP4Q99569 CD24P2-201ENST00000565486 219 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.39□□□□□ -1.55
PKP4Q99569 BNIP3P40-201ENST00000596017 556 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.39□□□□□ -1.55
PKP4Q99569 RNA5SP440-201ENST00000612665 119 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AL512506.1-201ENST00000613918 449 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AC007683.2-201ENST00000624681 714 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 AC103703.1-201ENST00000634783 663 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.39□□□□□ -1.55
PKP4Q99569 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 AL121950.1-201ENST00000624993 2077 ntBASIC5.39□□□□□ -1.55
PKP4Q99569 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PKP4Q99569 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PKP4Q99569 AC068446.1-201ENST00000556425 1549 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 CASC19-281ENST00000642118 1554 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 AC110792.3-201ENST00000595906 1614 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PKP4Q99569 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PKP4Q99569 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.38□□□□□ -1.55
PKP4Q99569 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PKP4Q99569 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 RN7SKP6-201ENST00000364795 319 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PKP4Q99569 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PKP4Q99569 MIR551A-201ENST00000385042 96 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 OR1F12-201ENST00000402365 945 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.38□□□□□ -1.55
PKP4Q99569 AL354692.1-201ENST00000423044 315 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 TNPO1P1-201ENST00000423641 1138 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 AC104843.2-201ENST00000427666 297 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 AL590623.1-201ENST00000427864 105 ntBASIC5.38□□□□□ -1.55
PKP4Q99569 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.38□□□□□ -1.55
PKP4Q99569 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms