Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 SPATA31C1-201ENST00000420021 3895 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 RNA5SP509-201ENST00000364577 119 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC006065.1-201ENST00000422539 802 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC016831.4-201ENST00000438302 307 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC011276.1-201ENST00000469688 323 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC093827.1-201ENST00000480094 861 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 NPM1P6-201ENST00000521088 871 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC007224.1-201ENST00000564410 144 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 OR8B1P-202ENST00000641132 1178 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.37□□□□□ -1.07
IFT140Q96RY7 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
IFT140Q96RY7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 U3.10-201ENST00000364459 214 ntBASIC8.36□□□□□ -1.07
IFT140Q96RY7 HYALP1-201ENST00000417674 1279 ntBASIC8.36□□□□□ -1.07
IFT140Q96RY7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.36□□□□□ -1.07
IFT140Q96RY7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.36□□□□□ -1.07
IFT140Q96RY7 RN7SL443P-201ENST00000464331 290 ntBASIC8.36□□□□□ -1.07
IFT140Q96RY7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.36□□□□□ -1.07
IFT140Q96RY7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.36□□□□□ -1.07
IFT140Q96RY7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
IFT140Q96RY7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC108751.5-201ENST00000492880 1336 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 RPL32P23-201ENST00000397237 405 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC114755.2-201ENST00000413520 361 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 TRGV7-201ENST00000427089 353 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC116562.1-201ENST00000485355 781 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC098976.1-201ENST00000513014 541 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC026688.1-201ENST00000520639 1168 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 MIR3939-201ENST00000582614 106 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC008782.1-201ENST00000603386 430 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC108738.1-201ENST00000603703 237 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC011626.1-201ENST00000604710 562 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 uc_338.7-201ENST00000621834 124 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 AC008785.1-201ENST00000624475 456 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 NCLP2-201ENST00000416078 1462 ntBASIC8.35□□□□□ -1.07
IFT140Q96RY7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
IFT140Q96RY7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
IFT140Q96RY7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
IFT140Q96RY7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
IFT140Q96RY7 AC079298.1-201ENST00000625026 1619 ntBASIC8.34□□□□□ -1.07
IFT140Q96RY7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
IFT140Q96RY7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 snoU13.22-201ENST00000459428 104 ntBASIC8.34□□□□□ -1.07
IFT140Q96RY7 RN7SL189P-201ENST00000468631 289 ntBASIC8.34□□□□□ -1.07
IFT140Q96RY7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 AC020593.1-201ENST00000507399 299 ntBASIC8.34□□□□□ -1.07
IFT140Q96RY7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
IFT140Q96RY7 AC068446.1-201ENST00000556425 1549 ntBASIC8.34□□□□□ -1.07
IFT140Q96RY7 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms