Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNPOQ8N3V7 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC062022.1-201ENST00000451026 1684 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 DDX18P4-201ENST00000511690 1966 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 RNU6-77P-201ENST00000410554 91 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 HMGB1P48-201ENST00000446155 598 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 RN7SL273P-201ENST00000481561 299 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC010343.2-201ENST00000510162 224 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC006499.4-201ENST00000510947 694 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC106800.3-201ENST00000511389 308 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 FABP5P12-201ENST00000515543 389 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 SEPT10P1-201ENST00000517342 1162 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AP002373.2-201ENST00000541631 1060 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL358913.1-201ENST00000554342 121 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL354943.1-201ENST00000572103 781 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL157899.1-201ENST00000604110 936 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL683813.2-201ENST00000605245 502 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC105227.2-201ENST00000615075 605 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC018659.2-201ENST00000624690 715 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC087821.2-201ENST00000637086 450 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC140479.2-201ENST00000421567 3130 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 OLMALINC-203ENST00000641087 3779 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AL359195.2-201ENST00000623657 4412 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 AC011455.2-201ENST00000599320 3336 ntBASIC6.42□□□□□ -1.38
SYNPOQ8N3V7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 BX005019.1-201ENST00000561881 1810 ntBASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 AC025809.2-201ENST00000625085 1802 ntBASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.41□□□□□ -1.38
SYNPOQ8N3V7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms