Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 CIR1P1-201ENST00000524055 1133 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC068305.2-201ENST00000550567 1205 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 HSPE1P2-201ENST00000554777 306 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 YWHAZP1-201ENST00000556286 722 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 MIMT1-201ENST00000597105 1050 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC079298.2-201ENST00000623885 459 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 FRG1EP-201ENST00000634469 770 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 PWAR1-201ENST00000624188 2414 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLIP4Q8N3C7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLIP4Q8N3C7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLIP4Q8N3C7 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.57
CLIP4Q8N3C7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CLIP4Q8N3C7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 RNU6-697P-201ENST00000363348 107 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 U3.7-201ENST00000363668 216 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC007618.1-201ENST00000366455 732 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 USP12PY-201ENST00000427677 1064 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 TCEA1P3-201ENST00000443005 880 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AP002345.1-201ENST00000456493 928 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 CTSLP6-201ENST00000458273 1002 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AP002884.1-201ENST00000479691 655 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC093663.2-201ENST00000484625 313 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 RNU6-334P-201ENST00000517072 102 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 IGLV3-24-201ENST00000517477 197 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AP000648.1-201ENST00000529682 397 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC063977.5-201ENST00000601044 974 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 BNIP3P38-201ENST00000601117 544 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC068620.3-201ENST00000602749 560 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AL031601.1-201ENST00000605702 394 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC090607.5-201ENST00000615692 224 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 AL109659.3-201ENST00000624985 950 ntBASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
CLIP4Q8N3C7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 AC106754.1-201ENST00000562632 1513 ntBASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLIP4Q8N3C7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms