Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NIPAL3Q6P499 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
NIPAL3Q6P499 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 KARSP1-201ENST00000451871 1752 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 OR9K1P-201ENST00000326513 941 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 OR1L6-202ENST00000373684 1044 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 MTND4LP13-201ENST00000425022 298 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC017019.1-201ENST00000426129 261 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AL389925.1-201ENST00000432257 728 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC092106.1-201ENST00000444291 373 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC073909.1-201ENST00000447112 999 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 RPL31P20-201ENST00000449593 360 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PRPF38AP1-201ENST00000451976 933 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AL049874.2-201ENST00000492636 288 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC016559.2-201ENST00000510759 359 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC117525.1-201ENST00000515228 503 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC018442.3-201ENST00000523025 183 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 OR11H3P-201ENST00000554547 982 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AP005403.1-201ENST00000579720 229 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PRPF19P1-201ENST00000584766 898 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC012616.1-201ENST00000600294 197 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AP000769.2-201ENST00000602344 396 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC002044.3-201ENST00000623314 541 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC135068.5-201ENST00000624197 983 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC073869.8-201ENST00000641806 335 ntBASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
NIPAL3Q6P499 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 RBPJP2-201ENST00000618187 1444 ntBASIC4.9□□□□□ -1.62
NIPAL3Q6P499 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NIPAL3Q6P499 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 SNORA11.3-201ENST00000408471 128 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AL691447.1-201ENST00000419456 387 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC019185.1-201ENST00000442718 389 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AP000281.1-201ENST00000444036 316 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC007386.1-201ENST00000455212 582 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 HSPE1P22-201ENST00000456856 327 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 RPL7P51-201ENST00000490532 749 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC109635.6-201ENST00000525487 1113 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC008147.3-201ENST00000548666 354 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC040958.1-201ENST00000561102 201 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC018552.1-201ENST00000562099 811 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC106730.2-201ENST00000566641 540 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC010487.1-201ENST00000594408 1172 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AC020915.5-201ENST00000596836 964 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 RNA5SP440-201ENST00000612665 119 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.9□□□□□ -1.63
NIPAL3Q6P499 AL118522.2-201ENST00000616045 615 ntBASIC4.9□□□□□ -1.63
NIPAL3Q6P499 SNORA11.6-201ENST00000619030 128 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms