Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TMEM53Q6P2H8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TMEM53Q6P2H8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TMEM53Q6P2H8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.98□□□□□ -1.61
TMEM53Q6P2H8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 TLK1P1-201ENST00000456760 2440 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 RLIMP2-201ENST00000427891 1563 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 OR52B1P-201ENST00000316506 909 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 RPS6P23-201ENST00000413224 722 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 COX5BP7-201ENST00000414780 274 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 RNF10P1-201ENST00000418589 369 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 BX119321.1-201ENST00000428912 797 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC084754.1-201ENST00000463466 464 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 RPL5P16-201ENST00000471467 790 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC021146.10-201ENST00000515628 706 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 RNU6-615P-201ENST00000516065 106 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC018552.1-201ENST00000562099 811 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 OR7M1P-201ENST00000608946 533 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AC138627.1-204ENST00000641894 765 ntBASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TMEM53Q6P2H8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TMEM53Q6P2H8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
TMEM53Q6P2H8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.96□□□□□ -1.61
TMEM53Q6P2H8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TMEM53Q6P2H8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 RNA5SP241-201ENST00000391326 114 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 HMGB1P20-201ENST00000402555 677 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 LYPLA1P3-201ENST00000402650 695 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 RPL12P43-201ENST00000420608 499 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 OR10T1P-201ENST00000424327 947 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC127526.2-201ENST00000426436 775 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 PCNPP2-201ENST00000441651 455 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 NXT1P1-201ENST00000458481 316 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 RPSAP37-201ENST00000470913 821 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 ATP5LP5-201ENST00000483050 299 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 RPS3AP15-201ENST00000483874 781 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC073610.1-201ENST00000489971 396 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 OR4A17P-201ENST00000526032 904 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 PMS2P3-207ENST00000529061 717 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC139697.1-201ENST00000548429 745 ntBASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.96□□□□□ -1.62
TMEM53Q6P2H8 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms