Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.02□□□□□ -1.29
RNF43Q68DV7 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.02□□□□□ -1.29
RNF43Q68DV7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF43Q68DV7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 KYNUP3-201ENST00000574386 1341 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL356317.1-201ENST00000396110 1436 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 FANCD2P2-201ENST00000437591 1400 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL359195.2-201ENST00000623657 4412 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC011504.1-201ENST00000623331 4103 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 STAG3L4-201ENST00000352103 530 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 RNA5SP435-201ENST00000364044 108 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL096711.1-201ENST00000404780 554 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 MTCO3P31-201ENST00000405526 789 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 RNU6-757P-201ENST00000410334 100 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 OFD1P18Y-201ENST00000420889 959 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 TRIM60P10Y-201ENST00000425589 751 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 USP9YP18-201ENST00000425912 695 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 RAC1P8-201ENST00000427086 527 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 ZNF619P1-201ENST00000446539 752 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 RPL23AP28-201ENST00000448062 470 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 KATNBL1P6-201ENST00000453433 915 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 RN7SL37P-201ENST00000490461 307 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC140063.1-201ENST00000541343 259 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC007068.2-201ENST00000543168 395 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 ZNF519P2-201ENST00000557032 169 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 WBP1LP12-201ENST00000604449 331 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC004948.1-201ENST00000609858 672 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC107075.1-201ENST00000613695 314 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC006338.1-201ENST00000618453 749 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 DUXAP9-208ENST00000622815 614 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AP002505.2-201ENST00000623585 696 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF43Q68DV7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC013488.1-201ENST00000526618 1838 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF43Q68DV7 AC010401.2-201ENST00000575137 4934 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 AL512310.3-201ENST00000547023 1335 ntBASIC7.01□□□□□ -1.29
RNF43Q68DV7 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7□□□□□ -1.29
RNF43Q68DV7 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 AL139384.2-201ENST00000613809 3590 ntBASIC7□□□□□ -1.29
RNF43Q68DV7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7□□□□□ -1.29
RNF43Q68DV7 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7□□□□□ -1.29
RNF43Q68DV7 NACA3P-201ENST00000359690 648 ntBASIC7□□□□□ -1.29
RNF43Q68DV7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF43Q68DV7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7□□□□□ -1.29
RNF43Q68DV7 RNU6-1200P-201ENST00000384162 107 ntBASIC7□□□□□ -1.29
RNF43Q68DV7 Y_RNA.554-201ENST00000384672 102 ntBASIC7□□□□□ -1.29
RNF43Q68DV7 UBBP1-201ENST00000392399 473 ntBASIC7□□□□□ -1.29
RNF43Q68DV7 AL391419.1-201ENST00000398901 1275 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms