Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RNU4-2-201ENST00000365668 141 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RNU1-136P-201ENST00000384181 164 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RPL12P18-201ENST00000437175 325 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RPL12P39-201ENST00000455456 496 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RN7SL177P-201ENST00000476596 299 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 EIF3LP3-201ENST00000495197 822 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 OR8K2P-201ENST00000524645 927 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 OR4A43P-201ENST00000532938 908 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 MIR4489-201ENST00000578869 62 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC012616.1-201ENST00000600294 197 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AP000864.1-201ENST00000609424 650 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC004241.3-201ENST00000611728 517 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AL359513.1-201ENST00000614364 557 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC132068.1-201ENST00000623805 459 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AC005618.4-201ENST00000625053 554 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 AL137141.1-201ENST00000624622 4836 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 OR9K1P-202ENST00000641111 3217 ntBASIC5.86□□□□□ -1.47
SNX30Q5VWJ9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 PWAR1-201ENST00000624188 2414 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 RN7SKP28-201ENST00000364770 305 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC005522.1-201ENST00000395416 346 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AL034403.1-201ENST00000399414 885 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 NPM1P4-201ENST00000414095 812 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 BX510359.3-201ENST00000422168 306 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 OR6D1P-201ENST00000436165 939 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 MTCYBP29-201ENST00000436327 1006 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC245517.2-201ENST00000442890 346 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 RANP1-206ENST00000455094 651 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC011225.1-201ENST00000457751 369 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC100832.1-201ENST00000471945 383 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 SIAH1P1-201ENST00000479411 923 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC093770.1-201ENST00000511559 571 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 BX510359.5-201ENST00000515651 304 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC010503.3-201ENST00000594355 540 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC040174.2-201ENST00000602701 465 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 MIR8080-201ENST00000622224 89 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AC079298.2-201ENST00000623885 459 ntBASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX30Q5VWJ9 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SNX30Q5VWJ9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms