Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL157702.1-201ENST00000398764 426 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 MTCO3P31-201ENST00000405526 789 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RN7SKP161-201ENST00000411110 305 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AL356968.2-201ENST00000412769 1257 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 TCEA1P4-201ENST00000415066 844 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 ATG4AP1-201ENST00000416893 538 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RWDD4P2-201ENST00000426392 563 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 MTND1P14-201ENST00000427400 950 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 CNOT7P1-201ENST00000429006 852 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX4Q06945 ATP5F1P1-201ENST00000433775 569 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX4Q06945 TRIM60P18-201ENST00000441518 828 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 PCNPP2-201ENST00000441651 455 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RPL5P10-201ENST00000445207 894 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX4Q06945 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX4Q06945 AL139156.3-201ENST00000454802 394 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 CTSLP6-201ENST00000458273 1002 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RN7SL705P-201ENST00000481678 294 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 OR11I1P-201ENST00000486033 954 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RN7SL170P-201ENST00000487098 295 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RN7SL362P-201ENST00000494228 267 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX4Q06945 RN7SKP244-201ENST00000516513 307 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 RNA5SP206-201ENST00000516703 121 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 Y_RNA.702-201ENST00000516843 96 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX4Q06945 OR6C7P-201ENST00000547875 934 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX4Q06945 CYP2C60P-201ENST00000566088 139 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC6.96□□□□□ -1.3
SOX4Q06945 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX4Q06945 MIR5708-201ENST00000579723 85 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX4Q06945 AC008507.1-201ENST00000587506 734 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 AL953862.2-201ENST00000603089 820 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 IMMP1LP1-201ENST00000605170 488 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 AL158211.4-201ENST00000606988 584 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX4Q06945 AC126177.8-201ENST00000618339 1015 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.96□□□□□ -1.3
SOX4Q06945 PCMTD1P7-201ENST00000634506 357 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 CASC19-246ENST00000641625 1606 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 AP001157.1-201ENST00000550837 2339 ntBASIC6.96□□□□□ -1.3
SOX4Q06945 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX4Q06945 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.96□□□□□ -1.3
SOX4Q06945 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SOX4Q06945 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SOX4Q06945 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.95□□□□□ -1.3
SOX4Q06945 AL391262.1-201ENST00000556558 1992 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX4Q06945 AL050335.1-201ENST00000396909 869 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AL035419.1-201ENST00000397037 564 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 VN1R12P-201ENST00000403778 876 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 NPM1P4-201ENST00000414095 812 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX4Q06945 AL035422.1-201ENST00000414193 397 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC099782.1-201ENST00000425889 474 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SOX4Q06945 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX4Q06945 LARP1BP3-201ENST00000437229 869 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 AL118496.2-201ENST00000448300 230 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC092001.1-201ENST00000453012 261 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC022206.1-201ENST00000495947 347 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC117522.1-201ENST00000509821 380 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 HMGB3P13-201ENST00000511263 607 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 ZNF519P4-201ENST00000514008 125 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX4Q06945 ZNF519P2-201ENST00000557032 169 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 TPRX1P1-201ENST00000557620 319 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.95□□□□□ -1.3
SOX4Q06945 AC090826.1-203ENST00000569235 490 ntBASIC6.95□□□□□ -1.3
SOX4Q06945 GLYATL1P2-202ENST00000588046 902 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms