Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL049872.1-201ENST00000556323 322 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC018552.1-201ENST00000562099 811 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AP000769.2-201ENST00000602344 396 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL034549.2-201ENST00000618285 3373 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 CASC19-204ENST00000641001 2055 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL596275.2-204ENST00000641628 552 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AL596275.2-206ENST00000641957 626 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 AC126323.6-202ENST00000568092 3511 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 OR51H2P-202ENST00000641424 3046 ntBASIC4.08□□□□□ -1.76
HIST1H1AQ02539 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIST1H1AQ02539 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 KARSP1-201ENST00000451871 1752 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC079298.1-201ENST00000625026 1619 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC005332.5-201ENST00000591222 2919 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 RPL34P3-201ENST00000421454 338 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC104333.2-201ENST00000422630 192 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AL662874.1-201ENST00000426065 230 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 CYCSP24-201ENST00000445119 316 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC092754.1-201ENST00000472975 479 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 RPS12P31-201ENST00000491419 398 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 IMPA1P1-201ENST00000510718 842 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 RN7SKP46-201ENST00000515942 234 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 RNA5SP360-201ENST00000516555 118 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC012616.1-201ENST00000600294 197 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC133552.5-201ENST00000604266 540 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC009027.1-201ENST00000604510 479 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AL133406.3-201ENST00000606817 541 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC008115.3-201ENST00000614874 549 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC093909.5-201ENST00000621839 1799 ntBASIC4.07□□□□□ -1.76
HIST1H1AQ02539 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HIST1H1AQ02539 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.06□□□□□ -1.76
HIST1H1AQ02539 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms