Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNNC1P63316 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 SMG1P4-204ENST00000523028 4131 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNNC1P63316 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TNNC1P63316 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNNC1P63316 MIR223-201ENST00000385204 110 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 AC012512.1-201ENST00000446594 718 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 RN7SL172P-201ENST00000460535 303 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 AC093827.1-201ENST00000480094 861 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 RPL7P6-201ENST00000480903 738 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 AC015864.1-201ENST00000496512 544 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.69□□□□□ -1.5
TNNC1P63316 AC021733.2-201ENST00000518830 497 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.69□□□□□ -1.5
TNNC1P63316 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNNC1P63316 LSM3P2-201ENST00000551246 273 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.69□□□□□ -1.5
TNNC1P63316 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.69□□□□□ -1.5
TNNC1P63316 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 AP002505.2-201ENST00000623585 696 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TNNC1P63316 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TNNC1P63316 AC011493.1-201ENST00000596753 1632 ntBASIC5.69□□□□□ -1.5
TNNC1P63316 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TNNC1P63316 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TNNC1P63316 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 AC017079.1-201ENST00000333650 415 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 RN7SKP153-201ENST00000365026 316 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 RNU6-171P-201ENST00000384354 107 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 FAR2P1-206ENST00000449736 709 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 HIGD1AP14-201ENST00000507617 282 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 LDHBP3-201ENST00000514909 822 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 RNA5SP34-201ENST00000516887 130 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.68□□□□□ -1.5
TNNC1P63316 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 AC022360.1-201ENST00000521058 340 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TNNC1P63316 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 AC126915.2-201ENST00000610957 190 ntBASIC5.68□□□□□ -1.5
TNNC1P63316 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TNNC1P63316 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TNNC1P63316 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TNNC1P63316 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TNNC1P63316 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TNNC1P63316 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.68□□□□□ -1.5
TNNC1P63316 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNNC1P63316 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNNC1P63316 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.67□□□□□ -1.5
TNNC1P63316 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.67□□□□□ -1.5
TNNC1P63316 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNNC1P63316 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNNC1P63316 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNNC1P63316 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TNNC1P63316 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TNNC1P63316 OR9G4-201ENST00000302957 984 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 CTSL3P-202ENST00000412179 788 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 AC211486.3-201ENST00000412694 621 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 AL121878.1-201ENST00000418638 859 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.67□□□□□ -1.5
TNNC1P63316 NANOGP4-201ENST00000427230 913 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 AC124944.2-201ENST00000429866 1242 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.67□□□□□ -1.5
TNNC1P63316 OR52B5P-201ENST00000435337 951 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.67□□□□□ -1.5
TNNC1P63316 CYCSP24-201ENST00000445119 316 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 Z92846.1-201ENST00000456203 268 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 RN7SL177P-201ENST00000476596 299 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 RPS4XP14-201ENST00000493072 781 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 AC023424.1-201ENST00000496058 459 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 RPS4XP20-201ENST00000505751 772 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.67□□□□□ -1.5
TNNC1P63316 RNA5SP373-201ENST00000517271 95 ntBASIC5.67□□□□□ -1.5
TNNC1P63316 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms