Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLDN6P56747 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN6P56747 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN6P56747 AC112184.1-201ENST00000505179 312 ntBASIC5.12□□□□□ -1.59
CLDN6P56747 AC109464.1-201ENST00000511091 819 ntBASIC5.12□□□□□ -1.59
CLDN6P56747 AC137627.1-201ENST00000545761 289 ntBASIC5.12□□□□□ -1.59
CLDN6P56747 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.12□□□□□ -1.59
CLDN6P56747 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLDN6P56747 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.12□□□□□ -1.59
CLDN6P56747 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN6P56747 AC068790.4-201ENST00000602474 263 ntBASIC5.12□□□□□ -1.59
CLDN6P56747 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLDN6P56747 AC092451.3-201ENST00000625067 1343 ntBASIC5.12□□□□□ -1.59
CLDN6P56747 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.12□□□□□ -1.59
CLDN6P56747 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN6P56747 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN6P56747 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
CLDN6P56747 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN6P56747 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN6P56747 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CLDN6P56747 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 RNA5SP453-201ENST00000362503 119 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 MIR600-201ENST00000385007 98 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 RPL11P3-201ENST00000395256 523 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN6P56747 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN6P56747 AC019050.1-201ENST00000418508 492 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 RPL7P56-201ENST00000429441 717 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN6P56747 RNU7-157P-201ENST00000459600 66 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 AC058823.1-201ENST00000485315 474 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 PRELID3BP5-201ENST00000508612 460 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 BTF3P13-201ENST00000513224 490 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 YWHABP2-201ENST00000540201 713 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN6P56747 AL512310.9-201ENST00000553311 948 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 AC005341.1-201ENST00000571086 708 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 MIR4691-201ENST00000583764 85 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 AC011447.4-201ENST00000587562 111 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN6P56747 MIR6758-201ENST00000620653 63 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 AC083837.1-201ENST00000565297 2994 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN6P56747 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLDN6P56747 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 AC116158.1-201ENST00000560231 2129 ntBASIC5.11□□□□□ -1.59
CLDN6P56747 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN6P56747 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN6P56747 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN6P56747 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLDN6P56747 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLDN6P56747 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLDN6P56747 GVINP1-202ENST00000531871 7271 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CLDN6P56747 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 AL121886.1-201ENST00000358609 435 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 RNA5SP505-201ENST00000364748 108 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
CLDN6P56747 RNU6-398P-201ENST00000384143 109 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 MIR192-201ENST00000384915 110 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN6P56747 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 EI24P4-201ENST00000423683 1078 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN6P56747 USP9YP9-201ENST00000429406 715 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 AC016712.1-201ENST00000431088 378 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN6P56747 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 AC073648.4-201ENST00000442655 781 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 AC011753.3-201ENST00000443436 406 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 GAPDHP25-201ENST00000447061 1001 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 NDUFA12P1-201ENST00000455914 406 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 RN7SL354P-201ENST00000469282 294 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 AC092754.1-201ENST00000472975 479 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 RPL7P16-201ENST00000479738 738 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 HPRT1P1-201ENST00000509498 657 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms