Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 NXT1P1-201ENST00000458481 316 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 RN7SL174P-201ENST00000475578 289 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 RN7SL177P-201ENST00000476596 299 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.82□□□□□ -1.48
HDAC4P56524 AC138866.2-201ENST00000508650 584 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.82□□□□□ -1.48
HDAC4P56524 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.82□□□□□ -1.48
HDAC4P56524 SNORA26.10-201ENST00000516427 141 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.82□□□□□ -1.48
HDAC4P56524 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.82□□□□□ -1.48
HDAC4P56524 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.82□□□□□ -1.48
HDAC4P56524 AC122134.1-202ENST00000569111 1201 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 AC010547.6-201ENST00000571789 193 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.82□□□□□ -1.48
HDAC4P56524 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.82□□□□□ -1.48
HDAC4P56524 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.82□□□□□ -1.48
HDAC4P56524 AC040174.2-201ENST00000602701 465 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 AL022394.1-201ENST00000606979 292 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 LINC00216-201ENST00000623548 1126 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 SNORA17.5-201ENST00000630429 132 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.82□□□□□ -1.48
HDAC4P56524 AC006453.5-201ENST00000636451 619 ntBASIC5.82□□□□□ -1.48
HDAC4P56524 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HDAC4P56524 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HDAC4P56524 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HDAC4P56524 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HDAC4P56524 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 AC083899.1-201ENST00000454465 3819 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 SOCS5P3-201ENST00000425115 1576 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HDAC4P56524 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.81□□□□□ -1.48
HDAC4P56524 RN7SKP185-201ENST00000362813 326 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HDAC4P56524 AL009179.1-201ENST00000406085 265 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 UBE2V1P15-201ENST00000407776 448 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 RNU2-22P-201ENST00000411266 212 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.81□□□□□ -1.48
HDAC4P56524 RPSAP35-201ENST00000413753 818 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 BMS1P17-202ENST00000416720 316 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AC013410.2-201ENST00000422627 201 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 Z84478.1-201ENST00000438230 1219 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AC064862.4-201ENST00000442180 334 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 LINC02210-201ENST00000444561 288 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 RPL31P20-201ENST00000449593 360 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AL450023.1-201ENST00000450868 751 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 RN7SL188P-201ENST00000469842 285 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.81□□□□□ -1.48
HDAC4P56524 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.81□□□□□ -1.48
HDAC4P56524 AC108157.1-201ENST00000510511 539 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 MTATP6P1-201ENST00000514057 681 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 OR4V1P-201ENST00000525394 1140 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.81□□□□□ -1.48
HDAC4P56524 OR5AM1P-201ENST00000532136 1032 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.81□□□□□ -1.48
HDAC4P56524 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.81□□□□□ -1.48
HDAC4P56524 MTND4LP25-201ENST00000570218 163 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.81□□□□□ -1.48
HDAC4P56524 MTND2P13-201ENST00000577438 1039 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.81□□□□□ -1.48
HDAC4P56524 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.81□□□□□ -1.48
HDAC4P56524 AL512506.1-201ENST00000613918 449 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AC074276.2-201ENST00000619891 348 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 AC005618.4-201ENST00000625053 554 ntBASIC5.81□□□□□ -1.48
HDAC4P56524 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.81□□□□□ -1.48
HDAC4P56524 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.81□□□□□ -1.48
HDAC4P56524 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HDAC4P56524 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
HDAC4P56524 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HDAC4P56524 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.81□□□□□ -1.48
HDAC4P56524 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HDAC4P56524 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.8□□□□□ -1.48
HDAC4P56524 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 MTND4LP7-201ENST00000431728 294 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.8□□□□□ -1.48
HDAC4P56524 FMO7P-201ENST00000436045 768 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 RPL36AP39-201ENST00000445859 318 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 HMGN1P36-201ENST00000446623 298 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HDAC4P56524 VDAC2P4-201ENST00000452925 711 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 AZGP1P2-201ENST00000454506 345 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 RN7SL583P-201ENST00000475692 287 ntBASIC5.8□□□□□ -1.48
HDAC4P56524 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
HDAC4P56524 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.8□□□□□ -1.48
HDAC4P56524 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.8□□□□□ -1.48
HDAC4P56524 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HDAC4P56524 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms