Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.8□□□□□ -1.32
PMS1P54277 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.8□□□□□ -1.32
PMS1P54277 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.8□□□□□ -1.32
PMS1P54277 AC007786.3-201ENST00000615154 596 ntBASIC6.8□□□□□ -1.32
PMS1P54277 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.8□□□□□ -1.32
PMS1P54277 AL392088.2-201ENST00000637607 285 ntBASIC6.8□□□□□ -1.32
PMS1P54277 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PMS1P54277 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
PMS1P54277 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PMS1P54277 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.8□□□□□ -1.32
PMS1P54277 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PMS1P54277 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.8□□□□□ -1.32
PMS1P54277 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.8□□□□□ -1.32
PMS1P54277 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PMS1P54277 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.8□□□□□ -1.32
PMS1P54277 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PMS1P54277 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PMS1P54277 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
PMS1P54277 AC073055.1-201ENST00000456901 1621 ntBASIC6.79□□□□□ -1.32
PMS1P54277 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 ZNF658B-201ENST00000602828 3408 ntBASIC6.79□□□□□ -1.32
PMS1P54277 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 RNA5SP485-201ENST00000365053 119 ntBASIC6.79□□□□□ -1.32
PMS1P54277 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 RNU6-157P-201ENST00000383957 107 ntBASIC6.79□□□□□ -1.32
PMS1P54277 SNORA70.9-201ENST00000384370 135 ntBASIC6.79□□□□□ -1.32
PMS1P54277 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
PMS1P54277 RSL24D1P4-201ENST00000400938 484 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AL121835.1-201ENST00000404250 354 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 LINC01347-201ENST00000417964 355 ntBASIC6.79□□□□□ -1.32
PMS1P54277 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 AC016027.5-201ENST00000427227 210 ntBASIC6.79□□□□□ -1.32
PMS1P54277 RPEP4-201ENST00000437636 602 ntBASIC6.79□□□□□ -1.32
PMS1P54277 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.79□□□□□ -1.32
PMS1P54277 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 AL445991.1-201ENST00000450381 475 ntBASIC6.79□□□□□ -1.32
PMS1P54277 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 AC097262.1-201ENST00000452559 548 ntBASIC6.79□□□□□ -1.32
PMS1P54277 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 AL035407.2-201ENST00000454090 378 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 AC026348.1-201ENST00000462549 1053 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC107015.1-201ENST00000466902 747 ntBASIC6.79□□□□□ -1.32
PMS1P54277 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 KHDC1P1-201ENST00000511053 508 ntBASIC6.79□□□□□ -1.32
PMS1P54277 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 snoZ278.1-201ENST00000517059 112 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC008429.4-201ENST00000521201 182 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.79□□□□□ -1.32
PMS1P54277 AC004890.3-201ENST00000605566 1095 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC072039.2-201ENST00000608883 439 ntBASIC6.79□□□□□ -1.32
PMS1P54277 VN1R74P-201ENST00000613259 503 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC105227.2-201ENST00000615075 605 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AC006338.2-201ENST00000616864 791 ntBASIC6.79□□□□□ -1.32
PMS1P54277 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 AL122023.1-201ENST00000622847 530 ntBASIC6.79□□□□□ -1.32
PMS1P54277 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 LINC01808-202ENST00000641680 1116 ntBASIC6.79□□□□□ -1.32
PMS1P54277 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 AP003486.1-201ENST00000525716 3994 ntBASIC6.79□□□□□ -1.32
PMS1P54277 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.79□□□□□ -1.32
PMS1P54277 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PMS1P54277 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PMS1P54277 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.78□□□□□ -1.32
PMS1P54277 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.78□□□□□ -1.32
PMS1P54277 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.78□□□□□ -1.32
PMS1P54277 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PMS1P54277 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PMS1P54277 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PMS1P54277 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PMS1P54277 RNU6-553P-201ENST00000364047 96 ntBASIC6.78□□□□□ -1.32
PMS1P54277 RNU6-353P-201ENST00000364266 108 ntBASIC6.78□□□□□ -1.32
PMS1P54277 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms