Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AKR1B10P1-201ENST00000425765 942 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AC005033.1-201ENST00000428904 813 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 RPEP4-201ENST00000437636 602 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AL353748.1-201ENST00000440753 474 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AL451050.1-201ENST00000450126 415 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.05□□□□□ -1.6
GTF2A1P52655 RN7SL393P-201ENST00000463588 296 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 RN7SL41P-201ENST00000476144 297 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.05□□□□□ -1.6
GTF2A1P52655 EIF4A2P5-201ENST00000529914 499 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.05□□□□□ -1.6
GTF2A1P52655 OR1F2P-201ENST00000570470 933 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.05□□□□□ -1.6
GTF2A1P52655 MIR3157-201ENST00000578688 85 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.05□□□□□ -1.6
GTF2A1P52655 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.05□□□□□ -1.6
GTF2A1P52655 OR1AB1P-201ENST00000585564 761 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AL139286.1-201ENST00000604465 483 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 U91328.4-201ENST00000608919 517 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AL139099.4-201ENST00000614802 114 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.05□□□□□ -1.6
GTF2A1P52655 AC129915.3-201ENST00000634128 948 ntBASIC5.05□□□□□ -1.6
GTF2A1P52655 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
GTF2A1P52655 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
GTF2A1P52655 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GTF2A1P52655 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.05□□□□□ -1.6
GTF2A1P52655 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.04□□□□□ -1.6
GTF2A1P52655 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.04□□□□□ -1.6
GTF2A1P52655 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
GTF2A1P52655 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC016588.2-201ENST00000632484 3021 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GTF2A1P52655 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.04□□□□□ -1.6
GTF2A1P52655 MIR130A-201ENST00000385274 89 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AL512422.1-201ENST00000407033 553 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC093414.1-201ENST00000434712 514 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AL353662.1-201ENST00000439099 327 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 AP002453.1-201ENST00000492327 668 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 AC025445.1-201ENST00000502728 300 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC007346.1-201ENST00000569208 867 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.04□□□□□ -1.6
GTF2A1P52655 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC090774.2-201ENST00000584708 322 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.04□□□□□ -1.6
GTF2A1P52655 AC025946.2-201ENST00000603398 234 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 AC092681.3-201ENST00000609463 678 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 AC074276.2-201ENST00000619891 348 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GTF2A1P52655 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.04□□□□□ -1.6
GTF2A1P52655 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
GTF2A1P52655 NEPNP-201ENST00000404786 1371 ntBASIC5.04□□□□□ -1.6
GTF2A1P52655 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
GTF2A1P52655 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
GTF2A1P52655 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
GTF2A1P52655 AC008627.1-201ENST00000517511 1704 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2A1P52655 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.03□□□□□ -1.6
GTF2A1P52655 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2A1P52655 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2A1P52655 RHOT1P2-201ENST00000366423 333 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GTF2A1P52655 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
GTF2A1P52655 AL096711.1-201ENST00000404780 554 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 RNA5SP198-201ENST00000410376 127 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 RNA5SP39-201ENST00000411245 120 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 AL035422.1-201ENST00000414193 397 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.03□□□□□ -1.6
GTF2A1P52655 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
GTF2A1P52655 DEFA9P-201ENST00000433042 285 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
GTF2A1P52655 PCNPP2-201ENST00000441651 455 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 PA2G4P1-201ENST00000442248 1197 ntBASIC5.03□□□□□ -1.6
GTF2A1P52655 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.03□□□□□ -1.6
GTF2A1P52655 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms