Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC068733.2-201ENST00000605434 1418 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 AC104083.1-201ENST00000569449 2615 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC007923.2-201ENST00000584218 1591 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 HSPD1P1-201ENST00000503199 1726 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 CASC19-221ENST00000641309 1382 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF144AP50876 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF144AP50876 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF144AP50876 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 AC069222.1-201ENST00000608028 3360 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF144AP50876 OR51A10P-201ENST00000307165 937 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 MIR369-201ENST00000362155 70 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF144AP50876 MIR614-201ENST00000385082 90 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 AL162578.1-201ENST00000406202 378 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 RPSAP72-201ENST00000407020 358 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AC023141.10-201ENST00000415634 200 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AL590806.1-201ENST00000415818 853 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF144AP50876 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 RPL23AP16-201ENST00000441715 421 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AC239860.1-201ENST00000444680 1270 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF144AP50876 AC233724.10-201ENST00000510454 409 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 RNU6-123P-201ENST00000516163 102 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 RNU6-445P-201ENST00000516949 107 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AC084251.1-201ENST00000521867 382 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 DEFB131D-201ENST00000526803 184 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.06□□□□□ -1.28
RNF144AP50876 CYCSP2-201ENST00000558168 301 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF144AP50876 RN7SL376P-201ENST00000578594 264 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 MIR4307-201ENST00000582802 84 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF144AP50876 AL590560.2-201ENST00000608430 732 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 FAM74A6-203ENST00000615956 481 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 AP006248.2-201ENST00000623309 592 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 AL132796.3-201ENST00000624703 900 ntBASIC7.06□□□□□ -1.28
RNF144AP50876 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RNF144AP50876 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF144AP50876 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF144AP50876 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF144AP50876 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RNF144AP50876 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF144AP50876 OR7E11P-202ENST00000642027 1491 ntBASIC7.05□□□□□ -1.28
RNF144AP50876 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC7.05□□□□□ -1.28
RNF144AP50876 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF144AP50876 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RNF144AP50876 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF144AP50876 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.05□□□□□ -1.28
RNF144AP50876 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.05□□□□□ -1.28
RNF144AP50876 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms