Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFC3P40938 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 RN7SKP185-201ENST00000362813 326 ntBASIC4.93□□□□□ -1.62
RFC3P40938 SNORA67-201ENST00000384423 137 ntBASIC4.93□□□□□ -1.62
RFC3P40938 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFC3P40938 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.93□□□□□ -1.62
RFC3P40938 NPM1P40-201ENST00000412758 733 ntBASIC4.93□□□□□ -1.62
RFC3P40938 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AC108075.1-201ENST00000424692 529 ntBASIC4.93□□□□□ -1.62
RFC3P40938 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.93□□□□□ -1.62
RFC3P40938 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFC3P40938 RPSAP50-201ENST00000481955 852 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.93□□□□□ -1.62
RFC3P40938 USP9YP2-201ENST00000504503 1000 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.93□□□□□ -1.62
RFC3P40938 USP9YP1-201ENST00000513521 1002 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.93□□□□□ -1.62
RFC3P40938 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.93□□□□□ -1.62
RFC3P40938 AC122688.1-201ENST00000541494 223 ntBASIC4.93□□□□□ -1.62
RFC3P40938 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.93□□□□□ -1.62
RFC3P40938 AC127381.1-201ENST00000555979 939 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AL390334.1-201ENST00000556395 450 ntBASIC4.93□□□□□ -1.62
RFC3P40938 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.93□□□□□ -1.62
RFC3P40938 MIR4472-2-201ENST00000582069 67 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AC060766.1-201ENST00000590824 627 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AL121612.2-201ENST00000612261 482 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AL139407.1-201ENST00000613826 1175 ntBASIC4.93□□□□□ -1.62
RFC3P40938 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 AC090510.2-201ENST00000617465 629 ntBASIC4.93□□□□□ -1.62
RFC3P40938 AC020763.5-201ENST00000623298 430 ntBASIC4.93□□□□□ -1.62
RFC3P40938 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RFC3P40938 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFC3P40938 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RFC3P40938 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFC3P40938 AC083899.1-201ENST00000454465 3819 ntBASIC4.92□□□□□ -1.62
RFC3P40938 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RFC3P40938 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFC3P40938 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.92□□□□□ -1.62
RFC3P40938 OR6C64P-201ENST00000419708 825 ntBASIC4.92□□□□□ -1.62
RFC3P40938 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.92□□□□□ -1.62
RFC3P40938 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 RN7SL826P-201ENST00000479724 288 ntBASIC4.92□□□□□ -1.62
RFC3P40938 OR2A3P-201ENST00000493774 953 ntBASIC4.92□□□□□ -1.62
RFC3P40938 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 HMGB1P44-201ENST00000508597 572 ntBASIC4.92□□□□□ -1.62
RFC3P40938 AC109464.1-201ENST00000511091 819 ntBASIC4.92□□□□□ -1.62
RFC3P40938 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 SETP1-201ENST00000556014 845 ntBASIC4.92□□□□□ -1.62
RFC3P40938 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 AC010547.7-201ENST00000570323 333 ntBASIC4.92□□□□□ -1.62
RFC3P40938 MIR3936-201ENST00000584304 110 ntBASIC4.92□□□□□ -1.62
RFC3P40938 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.92□□□□□ -1.62
RFC3P40938 AC004948.1-201ENST00000609858 672 ntBASIC4.92□□□□□ -1.62
RFC3P40938 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 MIR7155-201ENST00000615925 56 ntBASIC4.92□□□□□ -1.62
RFC3P40938 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.92□□□□□ -1.62
RFC3P40938 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFC3P40938 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFC3P40938 AL022322.2-201ENST00000624072 20397 ntBASIC4.92□□□□□ -1.62
RFC3P40938 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFC3P40938 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RFC3P40938 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RFC3P40938 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFC3P40938 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFC3P40938 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFC3P40938 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFC3P40938 LINC01963-201ENST00000562038 3148 ntBASIC4.91□□□□□ -1.62
RFC3P40938 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFC3P40938 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFC3P40938 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.91□□□□□ -1.62
RFC3P40938 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms