Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 RNA5SP123-201ENST00000363244 119 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 OR13C3-201ENST00000374781 1108 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 RNA5SP87-201ENST00000384155 118 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 SNORA51.8-201ENST00000384234 132 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 SNORD56.6-201ENST00000384569 71 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC8P31273 RNU4-64P-201ENST00000410795 131 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 AL139128.1-201ENST00000413921 941 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 TRY2P-201ENST00000448860 689 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 RPS3AP41-201ENST00000462701 778 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 MTND3P6-201ENST00000485242 339 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC105233.1-201ENST00000498840 781 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.83□□□□□ -1.48
HOXC8P31273 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC020915.5-201ENST00000596836 964 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC008814.1-201ENST00000603797 406 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC8P31273 AC244107.2-201ENST00000611773 76 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 AC087385.3-201ENST00000620477 187 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 AP003400.6-201ENST00000624698 740 ntBASIC5.83□□□□□ -1.48
HOXC8P31273 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC8P31273 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HOXC8P31273 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC8P31273 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC8P31273 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC8P31273 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC8P31273 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC8P31273 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC8P31273 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC8P31273 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC8P31273 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC8P31273 AL353625.1-202ENST00000366273 571 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 RNU2-22P-201ENST00000411266 212 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 AJ239321.1-201ENST00000424255 564 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC8P31273 AL772161.1-201ENST00000439130 476 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 BX679664.2-201ENST00000439282 283 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC8P31273 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC8P31273 AP000797.2-201ENST00000475768 606 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 CR383656.1-201ENST00000484916 377 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC8P31273 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 RNU6-319P-201ENST00000516025 108 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 SNORA48.9-201ENST00000516419 162 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 SNORA70.17-201ENST00000516449 133 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC8P31273 BRD9P1-201ENST00000529855 560 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC8P31273 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 MIR4480-201ENST00000582492 71 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 FAM60CP-201ENST00000591086 664 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 AC087783.2-201ENST00000605070 562 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC067838.1-201ENST00000606064 577 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC8P31273 AC091953.3-201ENST00000623220 236 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AC015660.5-201ENST00000623238 564 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 AP001153.1-201ENST00000641024 338 ntBASIC5.82□□□□□ -1.48
HOXC8P31273 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC8P31273 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC8P31273 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC8P31273 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms