Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.49□□□□□ -1.53
PCNAP12004 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.49□□□□□ -1.53
PCNAP12004 AC090330.1-201ENST00000588646 764 ntBASIC5.49□□□□□ -1.53
PCNAP12004 NANOGP3-201ENST00000605855 286 ntBASIC5.49□□□□□ -1.53
PCNAP12004 AC110792.4-201ENST00000609843 298 ntBASIC5.49□□□□□ -1.53
PCNAP12004 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.49□□□□□ -1.53
PCNAP12004 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCNAP12004 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCNAP12004 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCNAP12004 AP001005.3-201ENST00000622049 129 ntBASIC5.49□□□□□ -1.53
PCNAP12004 AC005618.4-201ENST00000625053 554 ntBASIC5.49□□□□□ -1.53
PCNAP12004 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.49□□□□□ -1.53
PCNAP12004 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.49□□□□□ -1.53
PCNAP12004 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.49□□□□□ -1.53
PCNAP12004 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 OR4K17-201ENST00000315543 1032 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AL159987.1-201ENST00000347911 293 ntBASIC5.48□□□□□ -1.53
PCNAP12004 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 RN7SKP185-201ENST00000362813 326 ntBASIC5.48□□□□□ -1.53
PCNAP12004 RN7SKP275-201ENST00000364626 301 ntBASIC5.48□□□□□ -1.53
PCNAP12004 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCNAP12004 OR13C3-201ENST00000374781 1108 ntBASIC5.48□□□□□ -1.53
PCNAP12004 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 RNU6-729P-201ENST00000384399 107 ntBASIC5.48□□□□□ -1.53
PCNAP12004 SNORD65-201ENST00000391079 73 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AL391422.1-201ENST00000402155 436 ntBASIC5.48□□□□□ -1.53
PCNAP12004 RPL10P10-201ENST00000403509 664 ntBASIC5.48□□□□□ -1.53
PCNAP12004 RN7SKP279-201ENST00000411383 298 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC096921.1-201ENST00000411661 375 ntBASIC5.48□□□□□ -1.53
PCNAP12004 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 RPS6P23-201ENST00000413224 722 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.48□□□□□ -1.53
PCNAP12004 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 TMEM183AP1-205ENST00000432739 290 ntBASIC5.48□□□□□ -1.53
PCNAP12004 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.48□□□□□ -1.53
PCNAP12004 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AL589765.3-201ENST00000446084 462 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.48□□□□□ -1.53
PCNAP12004 RPS23P9-201ENST00000448848 438 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.48□□□□□ -1.53
PCNAP12004 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 RN7SL570P-201ENST00000484405 292 ntBASIC5.48□□□□□ -1.53
PCNAP12004 OR7E157P-201ENST00000494376 911 ntBASIC5.48□□□□□ -1.53
PCNAP12004 GLUD1P3-202ENST00000508551 200 ntBASIC5.48□□□□□ -1.53
PCNAP12004 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.48□□□□□ -1.53
PCNAP12004 AC060775.1-201ENST00000518241 520 ntBASIC5.48□□□□□ -1.53
PCNAP12004 TRIM77BP-201ENST00000524985 1119 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.48□□□□□ -1.53
PCNAP12004 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AC139697.1-201ENST00000548429 745 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC093014.1-201ENST00000548926 724 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.48□□□□□ -1.53
PCNAP12004 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AGGF1P7-201ENST00000562369 913 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC093510.2-201ENST00000562820 896 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.48□□□□□ -1.53
PCNAP12004 AC134669.1-201ENST00000581275 672 ntBASIC5.48□□□□□ -1.53
PCNAP12004 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.48□□□□□ -1.53
PCNAP12004 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 COX6CP7-201ENST00000597056 208 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AC079315.1-201ENST00000602952 623 ntBASIC5.48□□□□□ -1.53
PCNAP12004 MTCO3P22-201ENST00000603219 784 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AL139407.1-201ENST00000613826 1175 ntBASIC5.48□□□□□ -1.53
PCNAP12004 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC022306.3-201ENST00000619930 550 ntBASIC5.48□□□□□ -1.53
PCNAP12004 AC022919.1-201ENST00000624979 626 ntBASIC5.48□□□□□ -1.53
PCNAP12004 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.48□□□□□ -1.53
PCNAP12004 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.48□□□□□ -1.53
PCNAP12004 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCNAP12004 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCNAP12004 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCNAP12004 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCNAP12004 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PCNAP12004 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms