Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTSDP07339 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.31□□□□□ -1.72
CTSDP07339 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTSDP07339 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTSDP07339 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CTSDP07339 EEF1B2P8-201ENST00000414101 671 ntBASIC4.31□□□□□ -1.72
CTSDP07339 VN1R3-201ENST00000418822 919 ntBASIC4.31□□□□□ -1.72
CTSDP07339 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.31□□□□□ -1.72
CTSDP07339 AL139148.1-201ENST00000427122 680 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.31□□□□□ -1.72
CTSDP07339 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 AC105399.1-202ENST00000447303 205 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 AL445665.1-202ENST00000452436 324 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AL356981.1-201ENST00000454879 684 ntBASIC4.31□□□□□ -1.72
CTSDP07339 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 RPL7P40-201ENST00000481703 745 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC005412.2-201ENST00000492004 341 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC073358.1-201ENST00000505671 684 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC109481.1-201ENST00000509173 282 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.31□□□□□ -1.72
CTSDP07339 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 RN7SKP99-201ENST00000517028 307 ntBASIC4.31□□□□□ -1.72
CTSDP07339 SNORA43.3-201ENST00000517240 103 ntBASIC4.31□□□□□ -1.72
CTSDP07339 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 AC027308.1-201ENST00000517993 110 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 NRBF2P4-201ENST00000520874 850 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 AC078878.1-201ENST00000539832 958 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.31□□□□□ -1.72
CTSDP07339 AP001496.3-201ENST00000580230 913 ntBASIC4.31□□□□□ -1.72
CTSDP07339 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 TAS2R6P-201ENST00000605022 826 ntBASIC4.31□□□□□ -1.72
CTSDP07339 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 MAPK10-320ENST00000641462 6696 ntBASIC4.31□□□□□ -1.72
CTSDP07339 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CTSDP07339 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CTSDP07339 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.31□□□□□ -1.72
CTSDP07339 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTSDP07339 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTSDP07339 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTSDP07339 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.3□□□□□ -1.72
CTSDP07339 TTC39DP-201ENST00000416781 1688 ntBASIC4.3□□□□□ -1.72
CTSDP07339 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTSDP07339 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CTSDP07339 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CTSDP07339 OR8V1P-201ENST00000395193 873 ntBASIC4.3□□□□□ -1.72
CTSDP07339 RN7SKP125-201ENST00000410481 302 ntBASIC4.3□□□□□ -1.72
CTSDP07339 RPL6P21-201ENST00000418672 846 ntBASIC4.3□□□□□ -1.72
CTSDP07339 AC012519.1-201ENST00000424588 610 ntBASIC4.3□□□□□ -1.72
CTSDP07339 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 PRUNEP1-201ENST00000425846 705 ntBASIC4.3□□□□□ -1.72
CTSDP07339 COX6CP13-201ENST00000428703 226 ntBASIC4.3□□□□□ -1.72
CTSDP07339 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.3□□□□□ -1.72
CTSDP07339 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.3□□□□□ -1.72
CTSDP07339 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 AC093166.2-201ENST00000455969 1017 ntBASIC4.3□□□□□ -1.72
CTSDP07339 AC084754.1-201ENST00000463466 464 ntBASIC4.3□□□□□ -1.72
CTSDP07339 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTSDP07339 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.3□□□□□ -1.72
CTSDP07339 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.3□□□□□ -1.72
CTSDP07339 RNA5SP249-201ENST00000516127 99 ntBASIC4.3□□□□□ -1.72
CTSDP07339 HNRNPRP2-201ENST00000528421 743 ntBASIC4.3□□□□□ -1.72
CTSDP07339 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.3□□□□□ -1.72
CTSDP07339 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.3□□□□□ -1.72
CTSDP07339 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.3□□□□□ -1.72
CTSDP07339 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.3□□□□□ -1.72
CTSDP07339 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.3□□□□□ -1.72
CTSDP07339 AC015982.1-201ENST00000608113 465 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms